Merge pull request #179773 from marsam/add-jupyter-book

python310Packages.jupyter-book: init at 0.13.0

Closes #132686

pkgs/development/python-modules/jupyter-book/default.nix

@@ -0,0 +1,80 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pythonOlder
+, flit-core
+, click
+, docutils
+, jinja2
+, jsonschema
+, linkify-it-py
+, myst-nb
+, pyyaml
+, sphinx
+, sphinx-comments
+, sphinx-copybutton
+, sphinx-external-toc
+, sphinx-jupyterbook-latex
+, sphinx-design
+, sphinx-thebe
+, sphinx-book-theme
+, sphinx-togglebutton
+, sphinxcontrib-bibtex
+, sphinx-multitoc-numbering
+}:
+
+buildPythonPackage rec {
+  pname = "jupyter-book";
+  version = "0.13.0";
+
+  format = "flit";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0a956677e7bbee630dd66641c09a84091277887d6dcdd381a676f00fa9de2074";
+  };
+
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace "jsonschema<4" "jsonschema" \
+      --replace "sphinx-external-toc~=0.2.3" "sphinx-external-toc" \
+      --replace "myst-nb~=0.13.1" "myst-nb" \
+      --replace "docutils>=0.15,<0.18" "docutils" \
+      --replace "sphinx-design~=0.1.0" "sphinx-design" \
+      --replace "linkify-it-py~=1.0.1" "linkify-it-py"
+  '';
+
+  nativeBuildInputs = [ flit-core ];
+
+  propagatedBuildInputs = [
+    click
+    docutils
+    jinja2
+    jsonschema
+    linkify-it-py
+    myst-nb
+    pyyaml
+    sphinx
+    sphinx-comments
+    sphinx-copybutton
+    sphinx-external-toc
+    sphinx-jupyterbook-latex
+    sphinx-design
+    sphinx-thebe
+    sphinx-book-theme
+    sphinx-togglebutton
+    sphinxcontrib-bibtex
+    sphinx-multitoc-numbering
+  ];
+
+  pythonImportsCheck = [ "jupyter_book" ];
+
+  meta = with lib; {
+    description = "Build a book with Jupyter Notebooks and Sphinx";
+    homepage = "https://executablebooks.org/";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/jupyter-cache/default.nix

@@ -0,0 +1,50 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, attrs
+, click
+, importlib-metadata
+, nbclient
+, nbformat
+, pyyaml
+, sqlalchemy
+, tabulate
+, pythonOlder
+}:
+
+buildPythonPackage rec {
+  pname = "jupyter-cache";
+  version = "0.5.0";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "87408030a4c8c14fe3f8fe62e6ceeb24c84e544c7ced20bfee45968053d07801";
+  };
+
+  postPatch = ''
+    substituteInPlace setup.cfg \
+      --replace "nbclient>=0.2,<0.6" "nbclient"
+  '';
+
+  propagatedBuildInputs = [
+    attrs
+    click
+    importlib-metadata
+    nbclient
+    nbformat
+    pyyaml
+    sqlalchemy
+    tabulate
+  ];
+
+  pythonImportsCheck = [ "jupyter_cache" ];
+
+  meta = with lib; {
+    description = "A defined interface for working with a cache of jupyter notebooks";
+    homepage = "https://github.com/executablebooks/jupyter-cache";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/myst-nb/default.nix

@@ -0,0 +1,56 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, flit-core
+, importlib-metadata
+, ipython
+, jupyter-cache
+, nbclient
+, myst-parser
+, nbformat
+, pyyaml
+, sphinx
+, sphinx-togglebutton
+, typing-extensions
+, ipykernel
+}:
+
+buildPythonPackage rec {
+  pname = "myst-nb";
+  version = "0.16.0";
+
+  format = "flit";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "9c7ab37929da72f78569a37bcccbc5d49fd679fd7935bf6c9fa36365eb58783a";
+  };
+
+  nativeBuildInputs = [ flit-core ];
+
+  propagatedBuildInputs = [
+    importlib-metadata
+    ipython
+    jupyter-cache
+    nbclient
+    myst-parser
+    nbformat
+    pyyaml
+    sphinx
+    sphinx-togglebutton
+    typing-extensions
+    ipykernel
+  ];
+
+  pythonImportsCheck = [ "myst_nb" ];
+
+  meta = with lib; {
+    description = "A Jupyter Notebook Sphinx reader built on top of the MyST markdown parser";
+    homepage = "https://github.com/executablebooks/myst-nb";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/pydata-sphinx-theme/default.nix

@@ -0,0 +1,42 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, sphinx
+, beautifulsoup4
+, docutils
+, packaging
+}:
+
+buildPythonPackage rec {
+  pname = "pydata-sphinx-theme";
+  version = "0.8.1";
+
+  format = "wheel";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit version format;
+    dist = "py3";
+    python = "py3";
+    pname = "pydata_sphinx_theme";
+    sha256 = "af2c99cb0b43d95247b1563860942ba75d7f1596360594fce510caaf8c4fcc16";
+  };
+
+  propagatedBuildInputs = [
+    sphinx
+    beautifulsoup4
+    docutils
+    packaging
+  ];
+
+  pythonImportsCheck = [ "pydata_sphinx_theme" ];
+
+  meta = with lib; {
+    description = "Bootstrap-based Sphinx theme from the PyData community";
+    homepage = "https://github.com/pydata/pydata-sphinx-theme";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/skia-pathops/default.nix

@@ -1,4 +1,5 @@
 { lib
+, stdenv
 , buildPythonPackage
 , cython
 , ninja
@@ -7,6 +8,9 @@
 , fetchPypi
 , gn
 , pytestCheckHook
+, xcodebuild
+, ApplicationServices
+, OpenGL
 }:
 
 buildPythonPackage rec {
@@ -26,7 +30,10 @@ buildPythonPackage rec {
         'build_cmd = [sys.executable, build_skia_py, "--no-fetch-gn", "--no-virtualenv", "--gn-path", "${gn}/bin/gn", build_dir]'
   '';
 
-  nativeBuildInputs = [ cython ninja setuptools-scm ];
+  nativeBuildInputs = [ cython ninja setuptools-scm ]
+    ++ lib.optionals stdenv.isDarwin [ xcodebuild ];
+
+  buildInputs = lib.optionals stdenv.isDarwin [ ApplicationServices OpenGL ];
 
   propagatedBuildInputs = [ setuptools ];
 

pkgs/development/python-modules/sphinx-book-theme/default.nix

@@ -0,0 +1,40 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, sphinx
+, pydata-sphinx-theme
+, pyyaml
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-book-theme";
+  version = "0.3.2";
+
+  format = "wheel";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit version format;
+    dist = "py3";
+    python = "py3";
+    pname = "sphinx_book_theme";
+    sha256 = "4aed92f2ed9d27e002eac5dce1daa8eca42dd9e6464811533c569ee156a6f67d";
+  };
+
+  propagatedBuildInputs = [
+    sphinx
+    pydata-sphinx-theme
+    pyyaml
+  ];
+
+  pythonImportsCheck = [ "sphinx_book_theme" ];
+
+  meta = with lib; {
+    description = "A clean book theme for scientific explanations and documentation with Sphinx";
+    homepage = "https://github.com/executablebooks/sphinx-book-theme";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-comments/default.nix

@@ -0,0 +1,26 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, sphinx
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-comments";
+  version = "0.0.3";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "00170afff27019fad08e421da1ae49c681831fb2759786f07c826e89ac94cf21";
+  };
+
+  propagatedBuildInputs = [ sphinx ];
+
+  pythonImportsCheck = [ "sphinx_comments" ];
+
+  meta = with lib; {
+    description = "Add comments and annotation to your documentation";
+    homepage = "https://github.com/executablebooks/sphinx-comments";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-design/default.nix

@@ -0,0 +1,35 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, flit-core
+, sphinx
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-design";
+  version = "0.2.0";
+
+  format = "flit";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit version;
+    pname = "sphinx_design";
+    sha256 = "b148a5258061a46ee826d57ea0729260f29b4e9131d2a681545e0d4f3c0f19ee";
+  };
+
+  nativeBuildInputs = [ flit-core ];
+
+  propagatedBuildInputs = [ sphinx ];
+
+  pythonImportsCheck = [ "sphinx_design" ];
+
+  meta = with lib; {
+    description = "A sphinx extension for designing beautiful, view size responsive web components";
+    homepage = "https://github.com/executablebooks/sphinx-design";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-external-toc/default.nix

@@ -0,0 +1,41 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, flit-core
+, click
+, pyyaml
+, sphinx
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-external-toc";
+  version = "0.3.0";
+
+  format = "flit";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit version;
+    pname = "sphinx_external_toc";
+    sha256 = "73198636ada4b4f72f69c7bab09f0e4ce84978056dc5afa9ee51d287bec0a8ef";
+  };
+
+  nativeBuildInputs = [ flit-core ];
+
+  propagatedBuildInputs = [
+    click
+    pyyaml
+    sphinx
+  ];
+
+  pythonImportsCheck = [ "sphinx_external_toc" ];
+
+  meta = with lib; {
+    description = "A sphinx extension that allows the site-map to be defined in a single YAML file";
+    homepage = "https://github.com/executablebooks/sphinx-external-toc";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-jupyterbook-latex/default.nix

@@ -0,0 +1,32 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, sphinx
+, importlib-resources
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-jupyterbook-latex";
+  version = "0.4.6";
+
+  disabled = pythonOlder "3.6";
+
+  src = fetchPypi {
+    inherit version;
+    pname = "sphinx_jupyterbook_latex";
+    sha256 = "8ff3775b11ab4798e6e8ec983601d7aea4c3b8e8b5d28ca758578ede3a791334";
+  };
+
+  propagatedBuildInputs = [ sphinx ]
+    ++ lib.optionals (pythonOlder "3.9") [ importlib-resources ];
+
+  pythonImportsCheck = [ "sphinx_jupyterbook_latex" ];
+
+  meta = with lib; {
+    description = "Latex specific features for jupyter book";
+    homepage = "https://github.com/executablebooks/sphinx-jupyterbook-latex";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-multitoc-numbering/default.nix

@@ -0,0 +1,26 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, sphinx
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-multitoc-numbering";
+  version = "0.1.3";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "c9607671ac511236fa5d61a7491c1031e700e8d498c9d2418e6c61d1251209ae";
+  };
+
+  propagatedBuildInputs = [ sphinx ];
+
+  pythonImportsCheck = [ "sphinx_multitoc_numbering" ];
+
+  meta = with lib; {
+    description = "Supporting continuous HTML section numbering";
+    homepage = "https://github.com/executablebooks/sphinx-multitoc-numbering";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-thebe/default.nix

@@ -0,0 +1,29 @@
+{ lib
+, buildPythonPackage
+, pythonOlder
+, fetchPypi
+, sphinx
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-thebe";
+  version = "0.1.2";
+
+  disabled = pythonOlder "3.6";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "756f1dd6643f5abb491f8a27b22825b04f47e05c5d214bbb2e6b5d42b621b85e";
+  };
+
+  propagatedBuildInputs = [ sphinx ];
+
+  pythonImportsCheck = [ "sphinx_thebe" ];
+
+  meta = with lib; {
+    description = "Integrate interactive code blocks into your documentation with Thebe and Binder";
+    homepage = "https://github.com/executablebooks/sphinx-thebe";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/development/python-modules/sphinx-togglebutton/default.nix

@@ -0,0 +1,28 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, wheel
+, sphinx
+, docutils
+}:
+
+buildPythonPackage rec {
+  pname = "sphinx-togglebutton";
+  version = "0.3.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1f13c25c27a8ff40d6fc924d324746c0adb0dedeef40730c8a8b64ff55c6c92c";
+  };
+
+  propagatedBuildInputs = [ wheel sphinx docutils ];
+
+  pythonImportsCheck = [ "sphinx_togglebutton" ];
+
+  meta = with lib; {
+    description = "Toggle page content and collapse admonitions in Sphinx";
+    homepage = "https://github.com/executablebooks/sphinx-togglebutton";
+    license = licenses.mit;
+    maintainers = with maintainers; [ marsam ];
+  };
+}

pkgs/top-level/python-packages.nix

@@ -3262,7 +3262,9 @@ in {
 
   fontmake = callPackage ../development/python-modules/fontmake { };
 
-  skia-pathops = callPackage ../development/python-modules/skia-pathops { };
+  skia-pathops = callPackage ../development/python-modules/skia-pathops {
+    inherit (pkgs.darwin.apple_sdk.frameworks) ApplicationServices OpenGL;
+  };
 
   openstep-plist = callPackage ../development/python-modules/openstep-plist { };
 
@@ -4607,8 +4609,12 @@ in {
 
   jupyter = callPackage ../development/python-modules/jupyter { };
 
+  jupyter-book = callPackage ../development/python-modules/jupyter-book { };
+
   jupyter-c-kernel = callPackage ../development/python-modules/jupyter-c-kernel { };
 
+  jupyter-cache = callPackage ../development/python-modules/jupyter-cache { };
+
   jupyter-client = callPackage ../development/python-modules/jupyter-client { };
 
   jupyter_console = callPackage ../development/python-modules/jupyter_console { };
@@ -5672,6 +5678,8 @@ in {
 
   mysql-connector = callPackage ../development/python-modules/mysql-connector { };
 
+  myst-nb = callPackage ../development/python-modules/myst-nb { };
+
   myst-parser = callPackage ../development/python-modules/myst-parser { };
 
   nad-receiver = callPackage ../development/python-modules/nad-receiver { };
@@ -7249,6 +7257,8 @@ in {
 
   pydash = callPackage ../development/python-modules/pydash { };
 
+  pydata-sphinx-theme = callPackage ../development/python-modules/pydata-sphinx-theme { };
+
   pydbus = callPackage ../development/python-modules/pydbus { };
 
   pydeck = callPackage ../development/python-modules/pydeck { };
@@ -9976,8 +9986,24 @@ in {
 
   sphinx-better-theme = callPackage ../development/python-modules/sphinx-better-theme { };
 
+  sphinx-book-theme = callPackage ../development/python-modules/sphinx-book-theme { };
+
+  sphinx-comments = callPackage ../development/python-modules/sphinx-comments { };
+
+  sphinx-design = callPackage ../development/python-modules/sphinx-design { };
+
+  sphinx-external-toc = callPackage ../development/python-modules/sphinx-external-toc { };
+
+  sphinx-jupyterbook-latex = callPackage ../development/python-modules/sphinx-jupyterbook-latex { };
+
+  sphinx-multitoc-numbering = callPackage ../development/python-modules/sphinx-multitoc-numbering { };
+
   sphinx-pytest = callPackage ../development/python-modules/sphinx-pytest { };
 
+  sphinx-thebe = callPackage ../development/python-modules/sphinx-thebe { };
+
+  sphinx-togglebutton = callPackage ../development/python-modules/sphinx-togglebutton { };
+
   sphinxcontrib-actdiag = callPackage ../development/python-modules/sphinxcontrib-actdiag { };
 
   sphinxcontrib-apidoc = callPackage ../development/python-modules/sphinxcontrib-apidoc { };