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febio: fix build

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This commit is contained in:
Weijia Wang 2023-04-29 00:10:19 +03:00
parent 0b863fe2df
commit 23b63e1fef
2 changed files with 9 additions and 3 deletions
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8
pkgs/development/libraries/febio/default.nix
View file

@ -1,5 +1,6 @@
{ lib, stdenv, fetchFromGitHub, cmake, boost, eigen, libxml2, mpi, python3 { lib, stdenv, fetchFromGitHub, cmake, boost, eigen, libxml2, mpi, python3
, mklSupport ? true, mkl , mklSupport ? true, mkl
, substituteAll
}: }:
stdenv.mkDerivation rec { stdenv.mkDerivation rec {
@ -14,13 +15,18 @@ stdenv.mkDerivation rec {
}; };
patches = [ patches = [
./fix-cmake.patch # cannot find mkl libraries without this (substituteAll {
src = ./fix-cmake.patch; # cannot find mkl libraries without this
so = stdenv.hostPlatform.extensions.sharedLibrary;
})
]; ];
cmakeFlags = lib.optional mklSupport "-DUSE_MKL=On" cmakeFlags = lib.optional mklSupport "-DUSE_MKL=On"
++ lib.optional mklSupport "-DMKLROOT=${mkl}" ++ lib.optional mklSupport "-DMKLROOT=${mkl}"
; ;
env.CXXFLAGS = lib.optionalString stdenv.isLinux "-include cstring";
installPhase = '' installPhase = ''
runHook preInstall runHook preInstall

4
pkgs/development/libraries/febio/fix-cmake.patch
View file

@ -5,7 +5,7 @@
PATHS ${${libDir}} NO_DEFAULT_PATH) PATHS ${${libDir}} NO_DEFAULT_PATH)
else() else()
- find_library(TEMP NAMES lib${libName}.a lib${ARGV3}.a lib${ARGV4}.a lib${ARGV5}.a lib${ARGV6}.a - find_library(TEMP NAMES lib${libName}.a lib${ARGV3}.a lib${ARGV4}.a lib${ARGV5}.a lib${ARGV6}.a
+ find_library(TEMP NAMES lib${libName}.a lib${ARGV3}.a lib${ARGV4}.a lib${ARGV5}.a lib${ARGV6}.a lib${libName}.so lib${ARGV3}.so lib${ARGV4}.so lib${ARGV5}.so lib${ARGV6}.so + find_library(TEMP NAMES lib${libName}.a lib${ARGV3}.a lib${ARGV4}.a lib${ARGV5}.a lib${ARGV6}.a lib${libName}@so@ lib${ARGV3}@so@ lib${ARGV4}@so@ lib${ARGV5}@so@ lib${ARGV6}@so@
PATHS ${${libDir}} NO_DEFAULT_PATH) PATHS ${${libDir}} NO_DEFAULT_PATH)
endif() endif()
@ -19,7 +19,7 @@ index 2d644005f..7261ba923 100644
find_library(MKL_OMP_LIB find_library(MKL_OMP_LIB
- NAMES iomp5 iomp5md libiomp5md.lib - NAMES iomp5 iomp5md libiomp5md.lib
- PATHS ${MKLROOT}/../lib ${MKLROOT}/../compiler/lib - PATHS ${MKLROOT}/../lib ${MKLROOT}/../compiler/lib
+ NAMES libiomp5.so libiomp5 iomp5 iomp5md libiomp5md.lib + NAMES libiomp5@so@ libiomp5 iomp5 iomp5md libiomp5md.lib
+ PATHS ${MKLROOT}/lib ${MKLROOT}/../lib ${MKLROOT}/../compiler/lib + PATHS ${MKLROOT}/lib ${MKLROOT}/../lib ${MKLROOT}/../compiler/lib
PATH_SUFFIXES "intel64" "intel32" PATH_SUFFIXES "intel64" "intel32"
NO_DEFAULT_PATH NO_DEFAULT_PATH