Merge master into staging-next

doc/stdenv/stdenv.chapter.md

@@ -887,7 +887,7 @@ Packages may expect or require other utilities to be available at runtime.
 
 Use `--prefix` to explicitly set dependencies in `PATH`.
 
-:::{note}
+::: {.note}
 `--prefix` essentially hard-codes dependencies into the wrapper.
 They cannot be overridden without rebuilding the package.
 :::

lib/types.nix

@@ -478,6 +478,7 @@ rec {
 
     path = mkOptionType {
       name = "path";
+      descriptionClass = "noun";
       check = x: isCoercibleToString x && builtins.substring 0 1 (toString x) == "/";
       merge = mergeEqualOption;
     };

nixos/doc/manual/from_md/release-notes/rl-2211.section.xml

@@ -1349,6 +1349,14 @@
           the npm install step prunes dev dependencies.
         </para>
       </listitem>
+      <listitem>
+        <para>
+          boot.kernel.sysctl is defined as a freeformType and adds a
+          custom merge option for <quote>net.core.rmem_max</quote>
+          (taking the highest value defined to avoid conflicts between 2
+          services trying to set that value)
+        </para>
+      </listitem>
     </itemizedlist>
   </section>
 </section>

nixos/doc/manual/release-notes/rl-2211.section.md

@@ -403,4 +403,6 @@ Available as [services.patroni](options.html#opt-services.patroni.enable).
 
 - The `nodePackages` package set now defaults to the LTS release in the `nodejs` package again, instead of being pinned to `nodejs-14_x`. Several updates to node2nix have been made for compatibility with newer Node.js and npm versions and a new `postRebuild` hook has been added for packages to perform extra build steps before the npm install step prunes dev dependencies.
 
+- boot.kernel.sysctl is defined as a freeformType and adds a custom merge option for "net.core.rmem_max" (taking the highest value defined to avoid conflicts between 2 services trying to set that value)
+
 <!-- To avoid merge conflicts, consider adding your item at an arbitrary place in the list instead. -->

nixos/modules/config/sysctl.nix

@@ -21,11 +21,24 @@ in
   options = {
 
     boot.kernel.sysctl = mkOption {
+      type = types.submodule {
+        freeformType = types.attrsOf sysctlOption;
+        options."net.core.rmem_max" = mkOption {
+          type = types.nullOr types.ints.unsigned // {
+            merge = loc: defs:
+              foldl
+                (a: b: if b.value == null then null else lib.max a b.value)
+                0
+                (filterOverrides defs);
+          };
+          default = null;
+          description = lib.mdDoc "The maximum socket receive buffer size. In case of conflicting values, the highest will be used.";
+        };
+      };
       default = {};
       example = literalExpression ''
         { "net.ipv4.tcp_syncookies" = false; "vm.swappiness" = 60; }
       '';
-      type = types.attrsOf sysctlOption;
       description = lib.mdDoc ''
         Runtime parameters of the Linux kernel, as set by
         {manpage}`sysctl(8)`.  Note that sysctl
@@ -35,6 +48,7 @@ in
         parameter may be a string, integer, boolean, or null
         (signifying the option will not appear at all).
       '';
+
     };
 
   };

nixos/modules/services/torrent/transmission.nix

@@ -431,7 +431,7 @@ in
       # https://trac.transmissionbt.com/browser/trunk/libtransmission/tr-udp.c?rev=11956.
       # at least up to the values hardcoded here:
       (mkIf cfg.settings.utp-enabled {
-        "net.core.rmem_max" = mkDefault "4194304"; # 4MB
+        "net.core.rmem_max" = mkDefault 4194304; # 4MB
         "net.core.wmem_max" = mkDefault "1048576"; # 1MB
       })
       (mkIf cfg.performanceNetParameters {

nixos/modules/services/web-apps/invoiceplane.nix

@@ -184,6 +184,26 @@ let
           '';
         };
 
+        cron = {
+
+          enable = mkOption {
+            type = types.bool;
+            default = false;
+            description = lib.mdDoc ''
+              Enable cron service which periodically runs Invoiceplane tasks.
+              Requires key taken from the administration page. Refer to
+              <https://wiki.invoiceplane.com/en/1.0/modules/recurring-invoices>
+              on how to configure it.
+            '';
+          };
+
+          key = mkOption {
+            type = types.str;
+            description = lib.mdDoc "Cron key taken from the administration page.";
+          };
+
+        };
+
       };
 
     };
@@ -224,8 +244,11 @@ in
       }
       { assertion = cfg.database.createLocally -> cfg.database.passwordFile == null;
         message = ''services.invoiceplane.sites."${hostName}".database.passwordFile cannot be specified if services.invoiceplane.sites."${hostName}".database.createLocally is set to true.'';
-      }]
+      }
-    ) eachSite);
+      { assertion = cfg.cron.enable -> cfg.cron.key != null;
+        message = ''services.invoiceplane.sites."${hostName}".cron.key must be set in order to use cron service.'';
+      }
+    ]) eachSite);
 
     services.mysql = mkIf (any (v: v.database.createLocally) (attrValues eachSite)) {
       enable = true;
@@ -255,6 +278,7 @@ in
   }
 
   {
+
     systemd.tmpfiles.rules = flatten (mapAttrsToList (hostName: cfg: [
       "d ${cfg.stateDir} 0750 ${user} ${webserver.group} - -"
       "f ${cfg.stateDir}/ipconfig.php 0750 ${user} ${webserver.group} - -"
@@ -284,6 +308,34 @@ in
       group = webserver.group;
       isSystemUser = true;
     };
+
+  }
+  {
+
+    # Cron service implementation
+
+    systemd.timers = mapAttrs' (hostName: cfg: (
+      nameValuePair "invoiceplane-cron-${hostName}" (mkIf cfg.cron.enable {
+        wantedBy = [ "timers.target" ];
+        timerConfig = {
+          OnBootSec = "5m";
+          OnUnitActiveSec = "5m";
+          Unit = "invoiceplane-cron-${hostName}.service";
+        };
+      })
+    )) eachSite;
+
+    systemd.services =
+      (mapAttrs' (hostName: cfg: (
+        nameValuePair "invoiceplane-cron-${hostName}" (mkIf cfg.cron.enable {
+          serviceConfig = {
+            Type = "oneshot";
+            User = user;
+            ExecStart = "${pkgs.curl}/bin/curl --header 'Host: ${hostName}' http://localhost/index.php/invoices/cron/recur/${cfg.cron.key}";
+          };
+        })
+    )) eachSite);
+
   }
 
   (mkIf (cfg.webserver == "caddy") {
@@ -302,6 +354,5 @@ in
     };
   })
 
-
   ]);
 }

nixos/modules/services/web-apps/nextcloud.nix

@@ -823,9 +823,9 @@ in {
               ${if c.dbhost != null then "--database-host" else null} = ''"${c.dbhost}"'';
               ${if c.dbport != null then "--database-port" else null} = ''"${toString c.dbport}"'';
               ${if c.dbuser != null then "--database-user" else null} = ''"${c.dbuser}"'';
-              "--database-pass" = "\$${dbpass.arg}";
+              "--database-pass" = "\"\$${dbpass.arg}\"";
               "--admin-user" = ''"${c.adminuser}"'';
-              "--admin-pass" = "\$${adminpass.arg}";
+              "--admin-pass" = "\"\$${adminpass.arg}\"";
               "--data-dir" = ''"${datadir}/data"'';
             });
           in ''

pkgs/applications/audio/ashuffle/default.nix

@@ -6,23 +6,26 @@
 , meson
 , ninja
 , libmpdclient
+, libyamlcpp
 }:
 
 stdenv.mkDerivation rec {
   pname = "ashuffle";
-  version = "3.12.5";
+  version = "3.13.4";
 
   src = fetchFromGitHub {
     owner = "joshkunz";
     repo = "ashuffle";
     rev = "v${version}";
-    sha256 = "sha256-dPgv6EzRxRdHkGvys601Bkg9Srd8oEjoE9jbAin74Vk=";
+    sha256 = "sha256-J6NN0Rsc9Zw9gagksDlwpwEErs+4XmrGF9YHKlAE1FA=";
     fetchSubmodules = true;
   };
 
   dontUseCmakeConfigure = true;
   nativeBuildInputs = [ cmake pkg-config meson ninja ];
-  buildInputs = [ libmpdclient ];
+  buildInputs = [ libmpdclient libyamlcpp ];
+
+  mesonFlags = [ "-Dunsupported_use_system_yamlcpp=true" ];
 
   meta = with lib; {
     homepage = "https://github.com/joshkunz/ashuffle";

pkgs/applications/networking/browsers/litebrowser/default.nix

@@ -0,0 +1,55 @@
+{ lib
+, stdenv
+, fetchFromGitHub
+, cmake
+, pkg-config
+, gtk3
+, gtkmm3
+, curl
+, poco
+, gumbo # litehtml dependency
+}:
+
+stdenv.mkDerivation {
+  pname = "litebrowser";
+  version = "unstable-2022-10-31";
+
+  src = fetchFromGitHub {
+    owner = "litehtml";
+    repo = "litebrowser-linux";
+    rev = "4654f8fb2d5e2deba7ac6223b6639341bd3b7eba";
+    hash = "sha256-SvW1AOxLBLKqa+/2u2Zn+/t33ZzQHmqlcLRl6z0rK9U=";
+    fetchSubmodules = true; # litehtml submodule
+  };
+
+  nativeBuildInputs = [
+    cmake
+    pkg-config
+  ];
+
+  buildInputs = [
+    gtk3
+    gtkmm3
+    curl
+    poco
+    gumbo
+  ];
+
+  cmakeFlags = [
+    "-DEXTERNAL_GUMBO=ON"
+  ];
+
+  installPhase = ''
+    runHook preInstall
+    install -Dm755 litebrowser $out/bin/litebrowser
+    runHook postInstall
+  '';
+
+  meta = with lib; {
+    description = "A simple browser based on the litehtml engine";
+    homepage = "https://github.com/litehtml/litebrowser-linux";
+    license = licenses.bsd3;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ fgaz ];
+  };
+}

pkgs/applications/networking/instant-messengers/discord/default.nix

@@ -2,7 +2,7 @@
 let
   versions = if stdenv.isLinux then {
     stable = "0.0.21";
-    ptb = "0.0.34";
+    ptb = "0.0.35";
     canary = "0.0.143";
   } else {
     stable = "0.0.264";
@@ -18,7 +18,7 @@ let
       };
       ptb = fetchurl {
         url = "https://dl-ptb.discordapp.net/apps/linux/${version}/discord-ptb-${version}.tar.gz";
-        sha256 = "CD6dLoBnlvhpwEFfLI9OqjhviZPj3xNDyPK9qBJUqck=";
+        sha256 = "bnp5wfcR21s7LMPxFgj5G3UsxPWlFj4t6CbeosiufHY=";
       };
       canary = fetchurl {
         url = "https://dl-canary.discordapp.net/apps/linux/${version}/discord-canary-${version}.tar.gz";

pkgs/applications/science/misc/toil/default.nix

@@ -1,33 +1,51 @@
 { lib
 , fetchFromGitHub
 , python3
+, rsync
 }:
 
 python3.pkgs.buildPythonApplication rec {
   pname = "toil";
-  version = "5.6.0";
+  version = "5.7.1";
   format = "setuptools";
 
-  src = python3.pkgs.fetchPypi {
+  src = fetchFromGitHub {
-    inherit pname version;
+    owner = "DataBiosphere";
-    sha256 = "sha256-m6tzrRCCLULO+wB8htUlt0KESLm/vdIeTzBrihnAo/I=";
+    repo = pname;
+    rev = "refs/tags/releases/${version}";
+    hash = "sha256-m+XvNyzd0ly2YqKhgxezgGaCXLs3CmupJMnp5RIZqNI=";
   };
 
+  postPatch = ''
+    substituteInPlace requirements.txt \
+      --replace "docker>=3.7.2, <6" "docker"
+  '';
+
   propagatedBuildInputs = with python3.pkgs; [
     addict
+    dill
     docker
-    pytz
-    pyyaml
     enlighten
     psutil
     py-tes
+    pypubsub
     python-dateutil
-    dill
+    pytz
+    pyyaml
+    requests
+    typing-extensions
   ];
 
-  checkInputs = with python3.pkgs; [
+  checkInputs = [
+    rsync
+  ] ++ (with python3.pkgs; [
+    boto
+    botocore
+    flask
+    mypy-boto3-s3
     pytestCheckHook
-  ];
+    stubserver
+  ]);
 
   pytestFlagsArray = [
     "src/toil/test"
@@ -37,6 +55,34 @@ python3.pkgs.buildPythonApplication rec {
     "toil"
   ];
 
+  disabledTestPaths = [
+    # Tests are reaching their timeout
+    "src/toil/test/docs/scriptsTest.py"
+    "src/toil/test/jobStores/jobStoreTest.py"
+    "src/toil/test/provisioners/aws/awsProvisionerTest.py"
+    "src/toil/test/src"
+    "src/toil/test/wdl"
+    "src/toil/test/utils/utilsTest.py"
+  ];
+
+  disabledTests = [
+    # Tests fail starting with 5.7.1
+    "testServices"
+    "testConcurrencyWithDisk"
+    "testJobConcurrency"
+    "testNestedResourcesDoNotBlock"
+    "test_omp_threads"
+    "testFileSingle"
+    "testFileSingle10000"
+    "testFileSingleCheckpoints"
+    "testFileSingleNonCaching"
+    "testFetchJobStoreFiles"
+    "testFetchJobStoreFilesWSymlinks"
+    "testJobStoreContents"
+    "test_cwl_on_arm"
+    "test_cwl_toil_kill"
+  ];
+
   meta = with lib; {
     description = "Workflow engine written in pure Python";
     homepage = "https://toil.ucsc-cgl.org/";

pkgs/applications/version-management/vcsh/default.nix

@@ -8,11 +8,11 @@
 
 stdenv.mkDerivation rec {
   pname = "vcsh";
-  version = "2.0.4";
+  version = "2.0.5";
 
   src = fetchurl {
     url = "https://github.com/RichiH/vcsh/releases/download/v${version}/${pname}-${version}.tar.xz";
-    sha256 = "sha256-W/Ql2J9HTDQPu0el34mHVzqe85KGWLPph2sHyuEzPPI=";
+    sha256 = "0bf3gacbyxw75ksd8y6528kgk7mqx6grz40gfiffxa2ghsz1xl01";
   };
 
   nativeBuildInputs = [

pkgs/applications/virtualization/open-vm-tools/default.nix

@@ -1,8 +1,41 @@
-{ stdenv, lib, fetchFromGitHub, makeWrapper, autoreconfHook
+{ stdenv
-, bash, fuse3, libmspack, openssl, pam, xercesc, icu, libdnet, procps, libtirpc, rpcsvc-proto
+, lib
-, libX11, libXext, libXinerama, libXi, libXrender, libXrandr, libXtst, libxcrypt
+, fetchFromGitHub
-, pkg-config, glib, gdk-pixbuf-xlib, gtk3, gtkmm3, iproute2, dbus, systemd, which
+, makeWrapper
-, libdrm, udev, util-linux
+, autoreconfHook
+, bash
+, fuse3
+, libmspack
+, openssl
+, pam
+, xercesc
+, icu
+, libdnet
+, procps
+, libtirpc
+, rpcsvc-proto
+, libX11
+, libXext
+, libXinerama
+, libXi
+, libXrender
+, libXrandr
+, libXtst
+, libxcrypt
+, libxml2
+, pkg-config
+, glib
+, gdk-pixbuf-xlib
+, gtk3
+, gtkmm3
+, iproute2
+, dbus
+, systemd
+, which
+, libdrm
+, udev
+, util-linux
+, xmlsec
 , withX ? true
 }:
 
@@ -11,9 +44,9 @@ stdenv.mkDerivation rec {
   version = "12.1.0";
 
   src = fetchFromGitHub {
-    owner  = "vmware";
+    owner = "vmware";
-    repo   = "open-vm-tools";
+    repo = "open-vm-tools";
-    rev    = "stable-${version}";
+    rev = "stable-${version}";
     hash = "sha256-PgrLu0Bm9Vom5WNl43312QFWKojdXDAGn3Nvj4hzPrQ=";
   };
 
@@ -21,46 +54,77 @@ stdenv.mkDerivation rec {
 
   outputs = [ "out" "dev" ];
 
-  nativeBuildInputs = [ autoreconfHook makeWrapper pkg-config ];
+  nativeBuildInputs = [
-  buildInputs = [ fuse3 glib icu libdnet libdrm libmspack libtirpc libxcrypt openssl pam procps rpcsvc-proto udev xercesc ]
+    autoreconfHook
-      ++ lib.optionals withX [ gdk-pixbuf-xlib gtk3 gtkmm3 libX11 libXext libXinerama libXi libXrender libXrandr libXtst ];
+    makeWrapper
+    pkg-config
+  ];
+
+  buildInputs = [
+    fuse3
+    glib
+    icu
+    libdnet
+    libdrm
+    libmspack
+    libtirpc
+    libxcrypt
+    libxml2
+    openssl
+    pam
+    procps
+    rpcsvc-proto
+    udev
+    xercesc
+    xmlsec
+  ] ++ lib.optionals withX [
+    gdk-pixbuf-xlib
+    gtk3
+    gtkmm3
+    libX11
+    libXext
+    libXinerama
+    libXi
+    libXrender
+    libXrandr
+    libXtst
+  ];
 
   postPatch = ''
-     sed -i 's,etc/vmware-tools,''${prefix}/etc/vmware-tools,' Makefile.am
+    sed -i Makefile.am \
-     sed -i 's,^confdir = ,confdir = ''${prefix},' scripts/Makefile.am
+      -e 's,etc/vmware-tools,''${prefix}/etc/vmware-tools,'
-     sed -i 's,usr/bin,''${prefix}/usr/bin,' scripts/Makefile.am
+    sed -i scripts/Makefile.am \
-     sed -i 's,etc/vmware-tools,''${prefix}/etc/vmware-tools,' services/vmtoolsd/Makefile.am
+      -e 's,^confdir = ,confdir = ''${prefix},' \
-     sed -i 's,$(PAM_PREFIX),''${prefix}/$(PAM_PREFIX),' services/vmtoolsd/Makefile.am
+      -e 's,usr/bin,''${prefix}/usr/bin,'
+    sed -i services/vmtoolsd/Makefile.am \
+      -e 's,etc/vmware-tools,''${prefix}/etc/vmware-tools,' \
+      -e 's,$(PAM_PREFIX),''${prefix}/$(PAM_PREFIX),'
+    sed -i vgauth/service/Makefile.am \
+      -e 's,/etc/vmware-tools/vgauth/schemas,''${prefix}/etc/vmware-tools/vgauth/schemas,' \
+      -e 's,$(DESTDIR)/etc/vmware-tools/vgauth.conf,''${prefix}/etc/vmware-tools/vgauth.conf,'
 
-     # Avoid a glibc >= 2.25 deprecation warning that gets fatal via -Werror.
+    # don't abort on any warning
-     sed 1i'#include <sys/sysmacros.h>' -i lib/wiper/wiperPosix.c
+    sed -i 's,CFLAGS="$CFLAGS -Werror",,' configure.ac
 
-     # Make reboot work, shutdown is not in /sbin on NixOS
+    # Make reboot work, shutdown is not in /sbin on NixOS
-     sed -i 's,/sbin/shutdown,shutdown,' lib/system/systemLinux.c
+    sed -i 's,/sbin/shutdown,shutdown,' lib/system/systemLinux.c
 
-     # Fix paths to fuse3 (we do not use fuse2 so that is not modified)
+    # Fix paths to fuse3 (we do not use fuse2 so that is not modified)
-     sed -i 's,/bin/fusermount3,${fuse3}/bin/fusermount3,' vmhgfs-fuse/config.c
+    sed -i 's,/bin/fusermount3,${fuse3}/bin/fusermount3,' vmhgfs-fuse/config.c
 
-     substituteInPlace services/plugins/vix/foundryToolsDaemon.c \
+    substituteInPlace services/plugins/vix/foundryToolsDaemon.c \
-      --replace "/usr/bin/vmhgfs-fuse" "${placeholder "out"}/bin/vmhgfs-fuse" \
+     --replace "/usr/bin/vmhgfs-fuse" "${placeholder "out"}/bin/vmhgfs-fuse" \
-      --replace "/bin/mount" "${util-linux}/bin/mount"
+     --replace "/bin/mount" "${util-linux}/bin/mount"
   '';
 
   configureFlags = [
     "--without-kernel-modules"
-    "--without-xmlsecurity"
     "--with-udev-rules-dir=${placeholder "out"}/lib/udev/rules.d"
     "--with-fuse=fuse3"
   ] ++ lib.optional (!withX) "--without-x";
 
   enableParallelBuilding = true;
 
-  NIX_CFLAGS_COMPILE = builtins.toString [
-    # fix build with gcc9
-    "-Wno-error=address-of-packed-member"
-    "-Wno-error=format-overflow"
-  ];
-
   preConfigure = ''
     mkdir -p ${placeholder "out"}/lib/udev/rules.d
   '';
@@ -79,7 +143,7 @@ stdenv.mkDerivation rec {
       better management of, and seamless user interactions with, guests.
     '';
     license = licenses.gpl2;
-    platforms =  [ "x86_64-linux" "i686-linux" "aarch64-linux" ];
+    platforms = [ "x86_64-linux" "i686-linux" "aarch64-linux" ];
     maintainers = with maintainers; [ joamaki ];
   };
 }

pkgs/development/interpreters/luau/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "luau";
-  version = "0.551";
+  version = "0.552";
 
   src = fetchFromGitHub {
     owner = "Roblox";
     repo = "luau";
     rev = version;
-    sha256 = "sha256-1IQeTq5eLn0jYtdc6SM0TuVJ3TUWUWtjQjAviba5ibw=";
+    sha256 = "sha256-dxxzM9VKN4yDkVpU3uQNgiFbBXBa+ALWSG/Ut6JKOEY=";
   };
 
   nativeBuildInputs = [ cmake ];

pkgs/development/libraries/litehtml/default.nix

@@ -0,0 +1,38 @@
+{ lib
+, stdenv
+, fetchFromGitHub
+, cmake
+, gumbo
+}:
+
+stdenv.mkDerivation rec {
+  pname = "litehtml";
+  version = "0.6";
+
+  src = fetchFromGitHub {
+    owner = "litehtml";
+    repo = "litehtml";
+    rev = "v${version}";
+    hash = "sha256-9571d3k8RkzEpMWPuIejZ7njLmYstSwFUaSqT3sk6uQ=";
+  };
+
+  nativeBuildInputs = [
+    cmake
+  ];
+
+  buildInputs = [
+    gumbo
+  ];
+
+  cmakeFlags = [
+    "-DEXTERNAL_GUMBO=ON"
+  ];
+
+  meta = with lib; {
+    description = "Fast and lightweight HTML/CSS rendering engine";
+    homepage = "http://www.litehtml.com/";
+    license = licenses.bsd3;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ fgaz ];
+  };
+}

pkgs/development/libraries/wxwidgets/wxGTK28.nix

@@ -1,115 +0,0 @@
-{ lib
-, stdenv
-, fetchurl
-, cairo
-, gtk2
-, libGL
-, libGLU
-, libSM
-, libX11
-, libXinerama
-, libXxf86vm
-, pkg-config
-, xorgproto
-, compat24 ? false
-, compat26 ? true
-, unicode ? true
-, withMesa ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms
-}:
-
-stdenv.mkDerivation rec {
-  pname = "wxGTK";
-  version = "2.8.12.1";
-
-  src = fetchurl {
-    url = "mirror://sourceforge/wxpython/wxPython-src-${version}.tar.bz2";
-    hash = "sha256-Hz8VPZ8VBMbOLSxLI+lAuPWLgfTLo1zaGluzEUIkPNA=";
-  };
-
-  nativeBuildInputs = [
-    pkg-config
-  ];
-
-  buildInputs = [
-    cairo
-    gtk2
-    libSM
-    libX11
-    libXinerama
-    libXxf86vm
-    xorgproto
-  ]
-  ++ lib.optional withMesa libGLU;
-
-  configureFlags = [
-    "--enable-gtk2"
-    "--disable-precomp-headers"
-    "--enable-mediactrl"
-    "--enable-graphics_ctx"
-    (if compat24 then "--enable-compat24" else "--disable-compat24")
-    (if compat26 then "--enable-compat26" else "--disable-compat26")
-  ]
-  ++ lib.optional unicode "--enable-unicode"
-  ++ lib.optional withMesa "--with-opengl";
-
-  hardeningDisable = [ "format" ];
-
-  # These variables are used by configure to find some dependencies.
-  SEARCH_INCLUDE =
-    "${libXinerama.dev}/include ${libSM.dev}/include ${libXxf86vm.dev}/include";
-  SEARCH_LIB =
-    "${libXinerama.out}/lib ${libSM.out}/lib ${libXxf86vm.out}/lib "
-    + lib.optionalString withMesa "${libGLU.out}/lib ${libGL.out}/lib ";
-
-  # Work around a bug in configure.
-  NIX_CFLAGS_COMPILE = "-DHAVE_X11_XLIB_H=1 -lX11 -lcairo -Wno-narrowing";
-
-  preConfigure = ''
-    substituteInPlace configure --replace \
-      'SEARCH_INCLUDE=' 'DUMMY_SEARCH_INCLUDE='
-    substituteInPlace configure --replace \
-      'SEARCH_LIB=' 'DUMMY_SEARCH_LIB='
-    substituteInPlace configure --replace \
-      /usr /no-such-path
-  '';
-
-  postBuild = ''
-    pushd contrib/src
-    make
-    popd
-  '';
-
-  postInstall = ''
-    pushd contrib/src
-    make install
-    popd
-    pushd $out/include
-    ln -s wx-*/* .
-    popd
-  '';
-
-  enableParallelBuilding = true;
-
-  meta = with lib; {
-    homepage = "https://www.wxwidgets.org/";
-    description = "A Cross-Platform C++ GUI Library";
-    longDescription = ''
-      wxWidgets gives you a single, easy-to-use API for writing GUI applications
-      on multiple platforms that still utilize the native platform's controls
-      and utilities. Link with the appropriate library for your platform and
-      compiler, and your application will adopt the look and feel appropriate to
-      that platform. On top of great GUI functionality, wxWidgets gives you:
-      online help, network programming, streams, clipboard and drag and drop,
-      multithreading, image loading and saving in a variety of popular formats,
-      database support, HTML viewing and printing, and much more.
-    '';
-    license = licenses.wxWindows;
-    maintainers = with maintainers; [ ];
-    platforms = platforms.linux;
-  };
-
-  passthru = {
-    inherit compat24 compat26 unicode;
-    gtk = gtk2;
-  };
-}

pkgs/development/libraries/wxwidgets/wxGTK29.nix

@@ -1,127 +0,0 @@
-{ lib
-, stdenv
-, fetchFromGitHub
-, autoconf
-, gtk2
-, libGL
-, libGLU
-, libSM
-, libXinerama
-, libXxf86vm
-, pkg-config
-, xorgproto
-, compat24 ? false
-, compat26 ? true
-, unicode ? true
-, withMesa ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms
-, AGL
-, Carbon
-, Cocoa
-, Kernel
-, QuickTime
-, setfile
-}:
-
-stdenv.mkDerivation rec {
-  pname = "wxGTK";
-  version = "2.9.5";
-
-  src = fetchFromGitHub {
-    owner = "wxWidgets";
-    repo = "wxWidgets";
-    rev = "v${version}";
-    hash = "sha256-izefAPU4lORZxQja7/InHyElJ1++2lDloR+xPudsRNE=";
-  };
-
-  patches = [
-    # https://github.com/wxWidgets/wxWidgets/issues/17942
-    ./patches/0001-fix-assertion-using-hide-in-destroy.patch
-  ];
-
-  nativeBuildInputs = [
-    autoconf
-    pkg-config
-  ];
-
-  buildInputs = [
-    gtk2
-    libSM
-    libXinerama
-    libXxf86vm
-    xorgproto
-  ]
-  ++ lib.optional withMesa libGLU
-  ++ lib.optionals stdenv.isDarwin [
-    Carbon
-    Cocoa
-    Kernel
-    QuickTime
-    setfile
-  ];
-
-  propagatedBuildInputs = lib.optional stdenv.isDarwin AGL;
-
-  configureFlags = [
-    "--disable-precomp-headers"
-    "--enable-gtk2"
-    (if compat24 then "--enable-compat24" else "--disable-compat24")
-    (if compat26 then "--enable-compat26" else "--disable-compat26")
-  ]
-  ++ lib.optional unicode "--enable-unicode"
-  ++ lib.optional withMesa "--with-opengl"
-  ++ lib.optionals stdenv.isDarwin [ # allow building on 64-bit
-    "--enable-universal-binaries"
-    "--with-cocoa"
-    "--with-macosx-version-min=10.7"
-  ];
-
-  SEARCH_LIB = "${libGLU.out}/lib ${libGL.out}/lib ";
-
-  preConfigure = ''
-    ./autogen.sh
-    substituteInPlace configure --replace \
-      'SEARCH_INCLUDE=' 'DUMMY_SEARCH_INCLUDE='
-    substituteInPlace configure --replace \
-      'SEARCH_LIB=' 'DUMMY_SEARCH_LIB='
-    substituteInPlace configure --replace \
-      /usr /no-such-path
-  '' + lib.optionalString stdenv.isDarwin ''
-    substituteInPlace configure --replace \
-      'ac_cv_prog_SETFILE="/Developer/Tools/SetFile"' \
-      'ac_cv_prog_SETFILE="${setfile}/bin/SetFile"'
-    substituteInPlace configure --replace \
-      "-framework System" "-lSystem"
-  '';
-
-  postInstall = ''
-    pushd $out/include
-    ln -s wx-*/* .
-    popd
-  '';
-
-  enableParallelBuilding = true;
-
-  meta = with lib; {
-    homepage = "https://www.wxwidgets.org/";
-    description = "A Cross-Platform C++ GUI Library";
-    longDescription = ''
-      wxWidgets gives you a single, easy-to-use API for writing GUI applications
-      on multiple platforms that still utilize the native platform's controls
-      and utilities. Link with the appropriate library for your platform and
-      compiler, and your application will adopt the look and feel appropriate to
-      that platform. On top of great GUI functionality, wxWidgets gives you:
-      online help, network programming, streams, clipboard and drag and drop,
-      multithreading, image loading and saving in a variety of popular formats,
-      database support, HTML viewing and printing, and much more.
-    '';
-    license = licenses.wxWindows;
-    maintainers = with maintainers; [ ];
-    platforms = platforms.darwin ++ platforms.linux;
-    badPlatforms = [ "x86_64-darwin" ];
-  };
-
-  passthru = {
-    inherit compat24 compat26 unicode;
-    gtk = gtk2;
-  };
-}

pkgs/development/libraries/xmlsec/default.nix

@@ -22,15 +22,20 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ pkg-config ];
 
-  buildInputs = [ libxml2 gnutls libxslt libgcrypt libtool openssl nss ];
+  buildInputs = [ libxml2 gnutls libgcrypt libtool openssl nss ];
+
+  propagatedBuildInputs = [
+    # required by xmlsec/transforms.h
+    libxslt
+  ];
 
   enableParallelBuilding = true;
   doCheck = true;
   checkInputs = [ nss.tools ];
   preCheck = ''
-  substituteInPlace tests/testrun.sh \
+    substituteInPlace tests/testrun.sh \
-    --replace 'timestamp=`date +%Y%m%d_%H%M%S`' 'timestamp=19700101_000000' \
+      --replace 'timestamp=`date +%Y%m%d_%H%M%S`' 'timestamp=19700101_000000' \
-    --replace 'TMPFOLDER=/tmp' '$(mktemp -d)'
+      --replace 'TMPFOLDER=/tmp' '$(mktemp -d)'
   '';
 
   # enable deprecated soap headers required by lasso
@@ -67,13 +72,14 @@ stdenv.mkDerivation rec {
     touch $out
   '';
 
-  meta = {
+  meta = with lib; {
     description = "XML Security Library in C based on libxml2";
-    homepage = "http://www.aleksey.com/xmlsec";
+    homepage = "https://www.aleksey.com/xmlsec/";
     downloadPage = "https://www.aleksey.com/xmlsec/download.html";
-    license = lib.licenses.mit;
+    license = licenses.mit;
     mainProgram = "xmlsec1";
-    platforms = with lib.platforms; linux ++ darwin;
+    maintainers = with maintainers; [ ];
+    platforms = with platforms; linux ++ darwin;
   };
 }
 )

pkgs/development/python-modules/ansible-doctor/default.nix

@@ -12,12 +12,13 @@
 , poetry-core
 , python-json-logger
 , pythonOlder
+, pythonRelaxDepsHook
 , ruamel-yaml
 }:
 
 buildPythonPackage rec {
   pname = "ansible-doctor";
-  version = "1.4.5";
+  version = "1.4.6";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -26,11 +27,19 @@ buildPythonPackage rec {
     owner = "thegeeklab";
     repo = "ansible-doctor";
     rev = "refs/tags/v${version}";
-    hash = "sha256-Bqe5dqD9VEgkkIGtpkLnCf3KTziCYb5HQdMJaskALWE=";
+    hash = "sha256-76IYH9IWeHU+PAtpLFGT5f8oG2roY3raW0NC3KUnFls=";
   };
 
+  pythonRelaxDeps = true;
+
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace 'version = "0.0.0"' 'version = "${version}"'
+  '';
+
   nativeBuildInputs = [
     poetry-core
+    pythonRelaxDepsHook
   ];
 
   propagatedBuildInputs = [
@@ -50,17 +59,6 @@ buildPythonPackage rec {
     rm $out/lib/python*/site-packages/LICENSE
   '';
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace 'version = "0.0.0"' 'version = "${version}"' \
-      --replace 'Jinja2 = "3.1.2"' 'Jinja2 = "*"' \
-      --replace 'anyconfig = "0.13.0"' 'anyconfig = "*"' \
-      --replace 'environs = "9.5.0"' 'environs = "*"' \
-      --replace 'jsonschema = "4.15.0"' 'jsonschema = "*"' \
-      --replace '"ruamel.yaml" = "0.17.21"' '"ruamel.yaml" = "*"' \
-      --replace 'python-json-logger = "2.0.4"' 'python-json-logger = "*"'
-  '';
-
   # Module has no tests
   doCheck = false;
 

pkgs/development/python-modules/apprise/default.nix

@@ -14,7 +14,6 @@
 , pyyaml
 , requests
 , requests-oauthlib
-, six
 , slixmpp
 }:
 
@@ -42,7 +41,6 @@ buildPythonPackage rec {
     pyyaml
     requests
     requests-oauthlib
-    six
   ];
 
   checkInputs = [
@@ -58,6 +56,11 @@ buildPythonPackage rec {
     "test_plugin_mqtt_general"
   ];
 
+  disabledTestPaths = [
+    # AttributeError: module 'apprise.plugins' has no attribute 'NotifyBulkSMS'
+    "test/test_plugin_bulksms.py"
+  ];
+
   postInstall = ''
     installManPage packaging/man/apprise.1
   '';

pkgs/development/python-modules/datasette-publish-fly/default.nix

@@ -0,0 +1,45 @@
+{ lib
+, buildPythonPackage
+, cogapp
+, datasette
+, fetchFromGitHub
+, pytest-mock
+, pytestCheckHook
+, pythonOlder
+}:
+
+buildPythonPackage rec {
+  pname = "datasette-publish-fly";
+  version = "1.2";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchFromGitHub {
+    owner = "simonw";
+    repo = pname;
+    rev = version;
+    hash = "sha256-0frP/RkpZX6LCR8cOlzcBG3pbcOh0KPuELlYUXS3dRE=";
+  };
+
+  propagatedBuildInputs = [
+    datasette
+  ];
+
+  checkInputs = [
+    cogapp
+    pytest-mock
+    pytestCheckHook
+  ];
+
+  pythonImportsCheck = [
+    "datasette_publish_fly"
+  ];
+
+  meta = with lib; {
+    description = "Datasette plugin for publishing data using Fly";
+    homepage = "https://datasette.io/plugins/datasette-publish-fly";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ fab ];
+  };
+}

pkgs/development/python-modules/dm-sonnet/default.nix

@@ -1,40 +1,45 @@
 { lib
-, fetchFromGitHub
-, buildPythonPackage
-, numpy
-, tabulate
-, six
-, dm-tree
 , absl-py
-, wrapt
+, buildPythonPackage
+, dm-tree
 , docutils
+, etils
+, fetchFromGitHub
+, numpy
+, pythonOlder
+, tabulate
 , tensorflow
-, tensorflow-datasets }:
+, tensorflow-datasets
+, wrapt
+}:
 
 buildPythonPackage rec {
   pname = "dm-sonnet";
   version = "2.0.0";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "deepmind";
     repo = "sonnet";
     rev = "v${version}";
-    sha256 = "sha256-YSMeH5ZTfP1OdLBepsxXAVczBG/ghSjCWjoz/I+TFl8=";
+    hash = "sha256-YSMeH5ZTfP1OdLBepsxXAVczBG/ghSjCWjoz/I+TFl8=";
   };
 
-  buildInputs = [
+  propagatedBuildInputs = [
-    absl-py
     dm-tree
+    etils
     numpy
-    six
     tabulate
     wrapt
-  ];
+  ] ++ etils.optional-dependencies.epath;
 
-  propagatedBuildInputs = [
+  passthru.optional-dependencies = {
-    tabulate
+    tensorflow = [
-    tensorflow
+      tensorflow
-  ];
+    ];
+  };
 
   checkInputs = [
     docutils

pkgs/development/python-modules/docker/default.nix

@@ -14,13 +14,14 @@
 
 buildPythonPackage rec {
   pname = "docker";
-  version = "6.0.0";
+  version = "6.0.1";
   format = "pyproject";
+
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-GeMwRwr0AWfSk7A1JXjB+iLXSzTT7fXU/5DrwgO7svE=";
+    hash = "sha256-iWxCguXHr1xF6LaDsLDDOTKXT+blD8aQagqDYWqz2pc=";
   };
 
   nativeBuildInputs = [
@@ -47,10 +48,16 @@ buildPythonPackage rec {
   ];
 
   # Deselect socket tests on Darwin because it hits the path length limit for a Unix domain socket
-  disabledTests = lib.optionals stdenv.isDarwin [ "api_test" "stream_response" "socket_file" ];
+  disabledTests = lib.optionals stdenv.isDarwin [
+    "api_test" "stream_response" "socket_file"
+  ];
 
   dontUseSetuptoolsCheck = true;
 
+  pythonImportsCheck = [
+    "docker"
+  ];
+
   meta = with lib; {
     description = "An API client for docker written in Python";
     homepage = "https://github.com/docker/docker-py";

pkgs/development/python-modules/stubserver/default.nix

@@ -0,0 +1,32 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pythonOlder
+}:
+
+buildPythonPackage rec {
+  pname = "stubserver";
+  version = "1.1";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    hash = "sha256-j9R7wpvb07FuN5EhIpE7xTSf26AniQZN4iLpxMjNYKA=";
+  };
+
+  # Tests are not shipped and the source not tagged
+  doCheck = false;
+
+  pythonImportsCheck = [
+    "stubserver"
+  ];
+
+  meta = with lib; {
+    description = "Web and FTP server for use in unit and7or acceptance tests";
+    homepage = "https://github.com/tarttelin/Python-Stub-Server";
+    license = licenses.bsd2;
+    maintainers = with maintainers; [ fab ];
+  };
+}

pkgs/development/tools/apksigcopier/default.nix

@@ -9,13 +9,13 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "apksigcopier";
-  version = "1.0.1";
+  version = "1.1.0";
 
   src = fetchFromGitHub {
     owner = "obfusk";
     repo = "apksigcopier";
-    rev = "v${version}";
+    rev = "refs/tags/v${version}";
-    sha256 = "07ldq3q1x2lpb15q5s5i1pbg89sn6ah45amskm9pndqlh16z9k2x";
+    sha256 = "sha256-58NoYe26GsNE0jpSRt4sIkTJ2iR4VVnvthOfi7QFfN0=";
   };
 
   nativeBuildInputs = [

pkgs/development/tools/kubie/default.nix

@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "kubie";
-  version = "0.19.0";
+  version = "0.19.1";
 
   src = fetchFromGitHub {
     rev = "v${version}";
     owner = "sbstp";
     repo = "kubie";
-    sha256 = "sha256-K7zoohyVBnRMqwpizBs+wlN/gkgGjBHNk1cwxY7P3Hs=";
+    sha256 = "sha256-tZ4qa48I/J62bqc9eoSSpTrJjU+LpweF/kI1TMiFrEY=";
   };
 
-  cargoSha256 = "sha256-feNmtUkpN+RdMrvF2ZY2BcZ0p8qEqw6Hr+p4be3YavA=";
+  cargoSha256 = "sha256-WpX1wkMPtUwT6KOi0Bij1tzGlDhti828wBSfzpXuZaY=";
 
   nativeBuildInputs = [ installShellFiles ];
 

pkgs/development/tools/millet/default.nix

@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "millet";
-  version = "0.5.12";
+  version = "0.5.13";
 
   src = fetchFromGitHub {
     owner = "azdavis";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-COVWn8RTUQSCHkjUgD9I+lZ4u/M7wqAV6tnDW7HIytY=";
+    sha256 = "sha256-2fb7jt/wTDLFxRPzJ8i/JmlQvXBG9zjmE7nYBfmMis8=";
   };
 
-  cargoSha256 = "sha256-/7I1RdDo2o2uMUVEMjSCltmU8eW39cCgpzHztePE3Kw=";
+  cargoSha256 = "sha256-JCO+IxDQeB3CTMpGD8D+1O7Vj2pBxvvnP9M48vVUEsc=";
 
   postPatch = ''
     rm .cargo/config.toml

pkgs/development/tools/misc/linuxkit/default.nix

@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "linuxkit";
-  version = "1.0.0";
+  version = "1.0.1";
 
   src = fetchFromGitHub {
     owner = "linuxkit";
     repo = "linuxkit";
     rev = "v${version}";
-    sha256 = "sha256-y/jsMr7HmrHjVMn4fyQ3MPHION8hQO2G4udX1AMx8bk=";
+    sha256 = "sha256-8x9oJaYb/mN2TUaVrGOYi5/6TETD78jif0SwCSc0kyo=";
   };
 
   vendorSha256 = null;

pkgs/os-specific/solo5/default.nix

@@ -2,7 +2,7 @@
 , pkg-config, qemu, syslinux, util-linux }:
 
 let
-  version = "0.7.3";
+  version = "0.7.4";
   # list of all theoretically available targets
   targets = [
     "genode"
@@ -21,11 +21,9 @@ in stdenv.mkDerivation {
 
   src = fetchurl {
     url = "https://github.com/Solo5/solo5/releases/download/v${version}/solo5-v${version}.tar.gz";
-    sha256 = "sha256-8LftT22XzmmWxgYez+BAHDX4HOyl5DrwrpuO2+bqqcY=";
+    sha256 = "sha256-ovDdaS2cDufe5gTgi+t2C8waWiRC40/2flLLJlz+NvU=";
   };
 
-  patches = [ ./fix_paths.patch ./test_sleep.patch ];
-
   hardeningEnable = [ "pie" ];
 
   configurePhase = ''

pkgs/os-specific/solo5/fix_paths.patch

@@ -1,29 +0,0 @@
-diff --git a/toolchain/cc.in b/toolchain/cc.in
-index 337562a..0ec9315 100644
---- a/toolchain/cc.in
-+++ b/toolchain/cc.in
-@@ -30,9 +30,9 @@
- # symbols.
- 
- prog="$(basename $0)"
--I="$(dirname $0)/../include"
-+I="$(realpath $0 | xargs dirname)/../include"
- [ ! -d "${I}" ] && echo "$prog: Could not determine include path" 1>&2 && exit 1
--L="$(dirname $0)/../lib/@@CONFIG_TARGET_TRIPLE@@"
-+L="$(realpath $0 | xargs dirname)/../lib/@@CONFIG_TARGET_TRIPLE@@"
- [ ! -d "${L}" ] && echo "$prog: Could not determine library path" 1>&2 && exit 1
- # we can't really tell if 'cc' is called with no input, but work around the
- # most obvious cases and stop them from "succeeding" and producing an "a.out"
-diff --git a/toolchain/ld.in b/toolchain/ld.in
-index 01dffa8..13dca2c 100644
---- a/toolchain/ld.in
-+++ b/toolchain/ld.in
-@@ -28,7 +28,7 @@
- # linking a unikernel. No default for ABI is provided, as it is expected that a
- # caller directly using 'ld' knows what they are doing.
- 
--L="$(dirname $0)/../lib/@@CONFIG_TARGET_TRIPLE@@"
-+L="$(realpath $0 | xargs dirname)/../lib/@@CONFIG_TARGET_TRIPLE@@"
- [ ! -d "${L}" ] && echo "$0: Could not determine library path" 1>&2 && exit 1
- # ld accepts -z solo5-abi=ABI, but does not provide a default ABI
- # this is intentional

pkgs/os-specific/solo5/test_sleep.patch

@@ -1,22 +0,0 @@
-diff --git a/tests/test_time/test_time.c b/tests/test_time/test_time.c
-index 931500b..cde64ad 100644
---- a/tests/test_time/test_time.c
-+++ b/tests/test_time/test_time.c
-@@ -110,7 +110,8 @@ int solo5_app_main(const struct solo5_start_info *si __attribute__((unused)))
-         /*
-          * Verify that we did not sleep less than requested (see above).
-          */
--        if (delta < NSEC_PER_SEC) {
-+        const solo5_time_t slack = 100000000ULL;
-+        if (delta < NSEC_PER_SEC - slack) {
-             printf("[%d] ERROR: slept too little (expected at least %llu ns)\n",
-                     iters, (unsigned long long)NSEC_PER_SEC);
-             failed = true;
-@@ -120,7 +121,6 @@ int solo5_app_main(const struct solo5_start_info *si __attribute__((unused)))
-          * Verify that we did not sleep more than requested, within reason
-          * (scheduling delays, general inaccuracy of the current timing code).
-          */
--        const solo5_time_t slack = 100000000ULL;
-         if (delta > (NSEC_PER_SEC + slack)) {
-             printf("[%d] ERROR: slept too much (expected at most %llu ns)\n",
-                     iters, (unsigned long long)slack);

pkgs/tools/compression/bzip3/default.nix

@@ -7,7 +7,7 @@
 
 stdenv.mkDerivation rec {
   pname = "bzip3";
-  version = "1.1.8";
+  version = "1.2.0";
 
   outputs = [ "bin" "dev" "out" ];
 
@@ -15,12 +15,15 @@ stdenv.mkDerivation rec {
     owner = "kspalaiologos";
     repo = "bzip3";
     rev = version;
-    hash = "sha256-ok5LwarXVe2gwwfIWVSfHHY0lt1IfGtkLPlVo757G6g=";
+    hash = "sha256-Ul4nybQ+Gj3i41AFxk2WzVD+b2dJVyCUBuX4ZGjXwUs=";
   };
 
   postPatch = ''
     echo -n "${version}" > .tarball-version
     patchShebangs build-aux
+
+    # build-aux/ax_subst_man_date.m4 calls git if the file exists
+    rm .gitignore
   '';
 
   nativeBuildInputs = [

pkgs/tools/misc/eva/default.nix

@@ -2,15 +2,14 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "eva";
-  version = "0.3.0-2";
+  version = "0.3.1";
 
   src = fetchCrate {
-    inherit pname;
+    inherit pname version;
-    version = "0.3.0";
+    sha256 = "sha256-eX2d9h6zNbheS68j3lyhJW05JZmQN2I2MdcmiZB8Mec=";
-    sha256 = "sha256-oeNv4rKZAl/gQ8b8Yr7fgQeeszJjzMcf9q1KzYpVS1Y=";
   };
 
-  cargoSha256 = "sha256-WBniKff9arVgNFBY2pwB0QgEBvzCL0Dls+6N49V86to=";
+  cargoSha256 = "sha256-gnym2sedyzQzubOtj64Yoh+sKT+sa60w/Z72hby7Pms=";
 
   meta = with lib; {
     description = "A calculator REPL, similar to bc";

pkgs/tools/misc/fluent-bit/default.nix

@@ -1,4 +1,4 @@
-{ lib, stdenv, fetchFromGitHub, cmake, flex, bison, systemd, openssl, libyaml }:
+{ lib, stdenv, fetchFromGitHub, cmake, flex, bison, systemd, postgresql, openssl, libyaml }:
 
 stdenv.mkDerivation rec {
   pname = "fluent-bit";
@@ -13,10 +13,10 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ cmake flex bison ];
 
-  buildInputs = [ openssl libyaml ]
+  buildInputs = [ openssl libyaml postgresql ]
     ++ lib.optionals stdenv.isLinux [ systemd ];
 
-  cmakeFlags = [ "-DFLB_METRICS=ON" "-DFLB_HTTP_SERVER=ON" ];
+  cmakeFlags = [ "-DFLB_METRICS=ON" "-DFLB_HTTP_SERVER=ON" "-DFLB_OUT_PGSQL=ON"  ];
 
   # _FORTIFY_SOURCE requires compiling with optimization (-O)
   NIX_CFLAGS_COMPILE = lib.optionals stdenv.cc.isGNU [ "-O" ]

pkgs/tools/misc/nncp/default.nix

@@ -3,12 +3,12 @@
 
 stdenv.mkDerivation rec {
   pname = "nncp";
-  version = "8.8.0";
+  version = "8.8.1";
   outputs = [ "out" "doc" "info" ];
 
   src = fetchurl {
     url = "http://www.nncpgo.org/download/${pname}-${version}.tar.xz";
-    sha256 = "829E2FB2F1EED8AF7ACE4554405E56F0341BE2A01C234A34D01122382AA0794C";
+    sha256 = "426463C97211AD88DF74DDDF61BDBB830BAE275668B2F23158D43146517469A6";
   };
 
   nativeBuildInputs = [ go redo-apenwarr ];
@@ -54,6 +54,7 @@ stdenv.mkDerivation rec {
     '';
     homepage = "http://www.nncpgo.org/";
     downloadPage = "http://www.nncpgo.org/Tarballs.html";
+    changelog = "http://www.nncpgo.org/News.html";
     license = licenses.gpl3Only;
     platforms = platforms.all;
     maintainers = with maintainers; [ ehmry woffs ];

pkgs/tools/networking/ghz/default.nix

@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "ghz";
-  version = "0.110.0";
+  version = "0.111.0";
 
   src = fetchFromGitHub {
     owner = "bojand";
     repo = "ghz";
     rev = "v${version}";
-    sha256 = "sha256-lAQGog45COrS2a5ZmFZEDERdZt24DnVSkPz49txqFmo=";
+    sha256 = "sha256-FXehWUdFHsWYF/WXrJtmoDIb0Smh3D4aSJS8aOpvoxg=";
   };
 
   vendorSha256 = "sha256-VjrSUP0SwE5iOTevqIGlnSjH+TV4Ajx/PKuco9etkSc=";

pkgs/tools/security/fwbuilder/default.nix

@@ -20,6 +20,13 @@ stdenv.mkDerivation rec {
     hash = "sha256-j5HjGcIqq93Ca9OBqEgSotoSXyw+q6Fqxa3hKk1ctwQ=";
   };
 
+  postPatch = ''
+    # Avoid blanket -Werror as it triggers on any minor compiler
+    # warnings like deprecated functions or invalid indentat8ion.
+    # Leave fixing these problems to upstream.
+    substituteInPlace CMakeLists.txt --replace ';-Werror;' ';'
+  '';
+
   nativeBuildInputs = [
     cmake
     ninja
@@ -32,11 +39,6 @@ stdenv.mkDerivation rec {
     qtwayland
   ];
 
-  NIX_CFLAGS_COMPILE = [
-    "-Wno-error=misleading-indentation"
-    "-Wno-error=deprecated-declarations"
-  ];
-
   meta = with lib; {
     description = "GUI Firewall Management Application";
     longDescription = ''

pkgs/tools/security/ghidra/build.nix

@@ -6,7 +6,7 @@
 , gradle
 , perl
 , makeWrapper
-, openjdk11
+, openjdk17
 , unzip
 , makeDesktopItem
 , autoPatchelfHook
@@ -19,13 +19,13 @@
 let
   pkg_path = "$out/lib/ghidra";
   pname = "ghidra";
-  version = "10.1.2";
+  version = "10.2";
 
   src = fetchFromGitHub {
     owner = "NationalSecurityAgency";
     repo = "Ghidra";
     rev = "Ghidra_${version}_build";
-    sha256 = "sha256-gnSIXje0hUpAculNXAyiS7Twc5XWitMgYp7svyZQxzE=";
+    sha256 = "sha256-b6xUSAZgyvpJFiG3/kl2s1vpq9n1etnoa7AJLF3NdZY=";
   };
 
   desktopItem = makeDesktopItem {
@@ -90,10 +90,10 @@ HERE
       export GRADLE_USER_HOME="$HOME/.gradle"
 
       # First, fetch the static dependencies.
-      gradle --no-daemon --info -Dorg.gradle.java.home=${openjdk11} -I gradle/support/fetchDependencies.gradle init
+      gradle --no-daemon --info -Dorg.gradle.java.home=${openjdk17} -I gradle/support/fetchDependencies.gradle init
 
       # Then, fetch the maven dependencies.
-      gradle --no-daemon --info -Dorg.gradle.java.home=${openjdk11} resolveDependencies
+      gradle --no-daemon --info -Dorg.gradle.java.home=${openjdk17} resolveDependencies
     '';
     # perl code mavenizes pathes (com.squareup.okio/okio/1.13.0/a9283170b7305c8d92d25aff02a6ab7e45d06cbe/okio-1.13.0.jar -> com/squareup/okio/okio/1.13.0/okio-1.13.0.jar)
     installPhase = ''
@@ -104,7 +104,7 @@ HERE
     '';
     outputHashAlgo = "sha256";
     outputHashMode = "recursive";
-    outputHash = "sha256-UHV7Z2HaVTOCY5U0zjUtkchJicrXMBfYBHvL8AA7NTg=";
+    outputHash = "sha256-Z4RS3IzDP8V3SrrwOuX/hTlX7fs3woIhR8GPK/tFAzs=";
   };
 
 in stdenv.mkDerivation rec {
@@ -128,7 +128,7 @@ in stdenv.mkDerivation rec {
 
     sed -i "s#mavenLocal()#mavenLocal(); maven { url '${deps}/maven' }#g" build.gradle
 
-    gradle --offline --no-daemon --info -Dorg.gradle.java.home=${openjdk11} buildGhidra
+    gradle --offline --no-daemon --info -Dorg.gradle.java.home=${openjdk17} buildGhidra
   '';
 
   installPhase = ''
@@ -156,7 +156,7 @@ in stdenv.mkDerivation rec {
     mkdir -p "$out/bin"
     ln -s "${pkg_path}/ghidraRun" "$out/bin/ghidra"
     wrapProgram "${pkg_path}/support/launch.sh" \
-      --prefix PATH : ${lib.makeBinPath [ openjdk11 ]}
+      --prefix PATH : ${lib.makeBinPath [ openjdk17 ]}
   '';
 
   meta = with lib; {

pkgs/tools/security/trueseeing/default.nix

@@ -31,7 +31,8 @@ python3.pkgs.buildPythonApplication rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace "attrs~=21.4" "attrs>=21.4"
+      --replace "attrs~=21.4" "attrs>=21.4" \
+      --replace "docker~=5.0.3" "docker"
   '';
 
   # Project has no tests

pkgs/tools/system/btop/default.nix

@@ -8,14 +8,13 @@
 
 stdenv.mkDerivation rec {
   pname = "btop";
-  version = "1.2.12";
+  version = "1.2.13";
-  hash = "sha256-ieNwFCDJF0U1wTfAeWM22CS3RE1SEp12ODHsRVYFoKU=";
 
   src = fetchFromGitHub {
     owner = "aristocratos";
     repo = pname;
     rev = "v${version}";
-    sha256 = hash;
+    hash = "sha256-F/muCjhcnM+VqAn6FlD4lv23OLITrmtnHkFc5zv97yk=";
   };
 
   ADDFLAGS = with darwin.apple_sdk.frameworks;

pkgs/tools/system/fio/default.nix

@@ -4,13 +4,13 @@
 
 stdenv.mkDerivation rec {
   pname = "fio";
-  version = "3.32";
+  version = "3.33";
 
   src = fetchFromGitHub {
     owner  = "axboe";
     repo   = "fio";
     rev    = "fio-${version}";
-    sha256 = "sha256-z9p9WDVjKQAQIP1v5RxnDXjwVl4SVZOvdxlSt5NZN1k=";
+    sha256 = "sha256-d4Fx2QdO+frt+gcBzegJ9CW5NJQRLNkML/iD3te/1d0=";
   };
 
   buildInputs = [ python3 zlib ]

pkgs/top-level/aliases.nix

@@ -1563,6 +1563,9 @@ mapAliases ({
   wormhole-rs = magic-wormhole-rs; # Added 2022-05-30. preserve, reason: Arch package name, main binary name
   wmii_hg = wmii;
   ws = throw "ws has been dropped due to the lack of maintenance from upstream since 2018"; # Added 2022-06-03
+  wxGTK = throw "wxGTK28 has been removed from nixpkgs as it has reached end of life"; # Added 2022-11-04
+  wxGTK28 = throw "wxGTK28 has been removed from nixpkgs as it has reached end of life"; # Added 2022-11-04
+  wxGTK29 = throw "wxGTK29 has been removed from nixpkgs as it has reached end of life"; # Added 2022-11-04
   wxGTK31-gtk2 = throw "'wxGTK31-gtk2' has been removed from nixpkgs as it depends on deprecated GTK2"; # Added 2022-10-27
   wxGTK31-gtk3 = throw "'wxGTK31-gtk3' has been renamed to/replaced by 'wxGTK31'"; # Added 2022-10-27
   wxmupen64plus = throw "wxmupen64plus was removed because the upstream disappeared"; # Added 2022-01-31

pkgs/top-level/all-packages.nix

@@ -21154,6 +21154,8 @@ with pkgs;
 
   liquidfun = callPackage ../development/libraries/liquidfun { };
 
+  litehtml = callPackage ../development/libraries/litehtml { };
+
   live555 = callPackage ../development/libraries/live555 { };
 
   log4cpp = callPackage ../development/libraries/log4cpp { };
@@ -22916,15 +22918,6 @@ with pkgs;
     inherit (darwin.apple_sdk.frameworks) Cocoa;
   };
 
-  wxGTK = wxGTK28;
-
-  wxGTK28 = callPackage ../development/libraries/wxwidgets/wxGTK28.nix { };
-
-  wxGTK29 = callPackage ../development/libraries/wxwidgets/wxGTK29.nix {
-    inherit (darwin.stubs) setfile;
-    inherit (darwin.apple_sdk.frameworks) AGL Carbon Cocoa Kernel QuickTime;
-  };
-
   wxGTK30 = callPackage ../development/libraries/wxwidgets/wxGTK30.nix {
     withGtk2 = true;
     inherit (darwin.stubs) setfile;
@@ -30026,6 +30019,8 @@ with pkgs;
 
   lingot = callPackage ../applications/audio/lingot { };
 
+  litebrowser = callPackage ../applications/networking/browsers/litebrowser { };
+
   littlegptracker = callPackage ../applications/audio/littlegptracker {
     inherit (darwin.apple_sdk.frameworks) Foundation;
   };
@@ -30616,7 +30611,10 @@ with pkgs;
 
   ninjas2 = callPackage ../applications/audio/ninjas2 {};
 
-  nncp = callPackage ../tools/misc/nncp { };
+  nncp = (
+    if stdenv.isDarwin
+    then darwin.apple_sdk_11_0.callPackage
+    else callPackage) ../tools/misc/nncp { };
 
   notion = callPackage ../applications/window-managers/notion { };
 

pkgs/top-level/python-packages.nix

@@ -2175,6 +2175,8 @@ self: super: with self; {
 
   datasette = callPackage ../development/python-modules/datasette { };
 
+  datasette-publish-fly = callPackage ../development/python-modules/datasette-publish-fly { };
+
   datasette-template-sql = callPackage ../development/python-modules/datasette-template-sql { };
 
   datashader = callPackage ../development/python-modules/datashader { };
@@ -10724,6 +10726,8 @@ self: super: with self; {
 
   structlog = callPackage ../development/python-modules/structlog { };
 
+  stubserver = callPackage ../development/python-modules/stubserver { };
+
   stumpy = callPackage ../development/python-modules/stumpy { };
 
   stups-cli-support = callPackage ../development/python-modules/stups-cli-support { };