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ncbi_tools: remove after being marked broken for over two years

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It was marked in commit b9948fedc6 by Robin Gloster on 2017-03-30 (commited on 2017-03-30)
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ajs124 2022-03-31 22:04:32 +02:00
parent 7a5f25594e
commit 60f1e6ffe2
2 changed files with 0 additions and 36 deletions
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34
pkgs/applications/science/biology/ncbi-tools/default.nix
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@ -1,34 +0,0 @@
{stdenv, fetchurl, cpio}:
# The NCBI package only builds on 32bits - on 64bits it breaks because
# of position dependent code. Debian packagers have written replacement
# make files(!). Either we use these, or negotiate a version which can
# be pushed upstream to NCBI.
#
# Another note: you may want the older and deprecated C-libs at ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/Mar_17_2008/NCBI_C_Toolkit/ncbi_c--Mar_17_2008.tar.gz
stdenv.mkDerivation rec {
pname = "ncbi_tools";
version = "Dec_31_2008";
src = fetchurl {
url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/${version}/ncbi_cxx--${version}.tar.gz";
sha256 = "1b2v0dcdqn3bysgdkj57sxmd6s0hc9wpnxssviz399g6plhxggbr";
};
configureFlags = [
"--without-debug"
"--with-bin-release"
"--with-dll"
"--without-static"
];
buildInputs = [ cpio ];
meta = {
description = "NCBI Bioinformatics toolbox (incl. BLAST)";
longDescription = "The NCBI Bioinformatics toolsbox, including command-line utilties, libraries and include files. No X11 support";
homepage = "http://www.ncbi.nlm.nih.gov/IEB/ToolBox/";
license = "GPL";
priority = 5; # zlib.so gives a conflict with zlib
broken = true;
};
}

2
pkgs/top-level/all-packages.nix
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@ -32353,8 +32353,6 @@ with pkgs;
mosdepth = callPackage ../applications/science/biology/mosdepth { };
ncbi_tools = callPackage ../applications/science/biology/ncbi-tools { };
niftyreg = callPackage ../applications/science/biology/niftyreg { };
niftyseg = callPackage ../applications/science/biology/niftyseg { };