Merge pull request #186459 from apraga/biodbhts-3.01
BioDBHTS : init 3.01
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commit
6f0cdeea23
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@ -1623,6 +1623,34 @@ with self; {
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BioExtAlign = callPackage ../development/perl-modules/Bio-Ext-Align { };
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BioDBHTS = buildPerlModule {
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pname = "Bio-DB-HTS";
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version = "3.01";
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src = fetchurl {
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url = "mirror://cpan/authors/id/A/AV/AVULLO/Bio-DB-HTS-3.01.tar.gz";
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sha256 = "12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42";
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};
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buildInputs = [ pkgs.htslib pkgs.zlib ];
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propagatedBuildInputs = [ BioPerl ];
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htslibStore = toString pkgs.htslib;
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postPatch = ''
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# -Wl,-rpath not recognized : replaced by -rpath=
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sed -i 's/Wl,-rpath,/rpath=/' Build.PL
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'';
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preBuild = ''
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export HTSLIB_DIR=${pkgs.htslib}
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'';
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meta = {
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description = "Perl interface to HTS library for DNA sequencing";
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license = lib.licenses.asl20;
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};
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};
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BioPerl = buildPerlPackage {
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pname = "BioPerl";
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version = "1.7.8";
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