From 96c4ebd54288a332f0f58c0243bdbbf85cb9c792 Mon Sep 17 00:00:00 2001
From: "Robert T. McGibbon" <rmcgibbo@gmail.com>
Date: Tue, 27 Apr 2021 13:30:46 -0400
Subject: [PATCH] python3Packages.spectral-cube: add patch for radio_beam >=
 0.3.3

---
 .../python-modules/spectral-cube/default.nix   | 18 ++++++++++++------
 1 file changed, 12 insertions(+), 6 deletions(-)

diff --git a/pkgs/development/python-modules/spectral-cube/default.nix b/pkgs/development/python-modules/spectral-cube/default.nix
index d2f79c18348..329b225b576 100644
--- a/pkgs/development/python-modules/spectral-cube/default.nix
+++ b/pkgs/development/python-modules/spectral-cube/default.nix
@@ -1,11 +1,12 @@
 { lib
 , fetchPypi
+, fetchpatch
 , buildPythonPackage
 , aplpy
 , joblib
 , astropy
 , radio_beam
-, pytest
+, pytestCheckHook
 , pytest-astropy
 , astropy-helpers
 }:
@@ -20,13 +21,18 @@ buildPythonPackage rec {
     sha256 = "17zisr26syfb8kn89xj17lrdycm0hsmy5yp5zrn236wgd8rjriki";
   };
 
+  patches = [
+    # Fix compatibility with radio_beam >= 0.3.3. Will be included
+    # in the next release of spectral cube > 0.5.0
+    (fetchpatch {
+      url = "https://github.com/radio-astro-tools/spectral-cube/commit/bbe4295ebef7dfa6fe4474275a29acd6cb0cb544.patch";
+    sha256 = "1qddfm3364kc34yf6wd9nd6rxh4qc2v5pqilvz9adwb4a50z28bf";
+    })
+  ];
+
   nativeBuildInputs = [ astropy-helpers ];
   propagatedBuildInputs = [ astropy radio_beam joblib ];
-  checkInputs = [ aplpy pytest pytest-astropy ];
-
-  checkPhase = ''
-    pytest spectral_cube
-  '';
+  checkInputs = [ pytestCheckHook aplpy pytest-astropy ];
 
   meta = {
     description = "Library for reading and analyzing astrophysical spectral data cubes";