Merge pull request #208132 from wegank/cmdstan-aarch64-linux

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Sandro 2023-01-10 11:46:50 +01:00 committed by GitHub
commit b5bd459f79
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3 changed files with 66 additions and 22 deletions

View file

@ -1,25 +1,18 @@
{ lib, stdenv, fetchurl, python3, runtimeShell }:
{ lib, stdenv, fetchFromGitHub, stanc, python3, buildPackages, runtimeShell }:
let
# FIXME: remove conditional on future release
version = if stdenv.isx86_64 then "2.31.0" else "2.30.1";
# includes stanc binaries needed to build cmdstand
srcs = rec {
aarch64-linux = fetchurl {
url = "https://github.com/stan-dev/cmdstan/releases/download/v${version}/cmdstan-${version}-linux-arm64.tar.gz";
sha256 = "sha256-oj/7JHT4LZcRAHiA2KbM6pZbOe6C98Ff//cNsG9DIm8=";
};
x86_64-darwin = fetchurl {
url = "https://github.com/stan-dev/cmdstan/releases/download/v${version}/cmdstan-${version}.tar.gz";
sha256 = "sha256-BMqRRWIC/Z7It2qkESJd9L3ycyxvA6NHiWbAvzVMzIQ=";
};
x86_64-linux = x86_64-darwin;
};
src = srcs.${stdenv.hostPlatform.system} or (throw "Unsupported system: ${stdenv.hostPlatform.system}");
in
stdenv.mkDerivation rec {
pname = "cmdstan";
inherit version src;
version = "2.31.0";
src = fetchFromGitHub {
owner = "stan-dev";
repo = pname;
rev = "v${version}";
fetchSubmodules = true;
sha256 = "sha256-Uh/ZhEnbhQwC8xGFjDzH9No3VRgVbHYk2KoC+e3YhJw=";
};
nativeBuildInputs = [ stanc ];
buildFlags = [ "build" ];
enableParallelBuilding = true;
@ -38,6 +31,13 @@ stdenv.mkDerivation rec {
src/test/interface/stansummary_test.cpp
'';
preConfigure = ''
mkdir -p bin
ln -s ${buildPackages.stanc}/bin/stanc bin/stanc
'';
makeFlags = lib.optional stdenv.isDarwin "arch=${stdenv.hostPlatform.darwinArch}";
checkPhase = ''
./runCmdStanTests.py -j$NIX_BUILD_CORES src/test/interface
'';
@ -57,7 +57,7 @@ stdenv.mkDerivation rec {
# Hack to ensure that patchelf --shrink-rpath get rids of a $TMPDIR reference.
preFixup = "rm -rf stan";
meta = {
meta = with lib; {
description = "Command-line interface to Stan";
longDescription = ''
Stan is a probabilistic programming language implementing full Bayesian
@ -66,7 +66,8 @@ stdenv.mkDerivation rec {
likelihood estimation with Optimization (L-BFGS).
'';
homepage = "https://mc-stan.org/interfaces/cmdstan.html";
license = lib.licenses.bsd3;
platforms = [ "aarch64-linux" "x86_64-darwin" "x86_64-linux" ];
license = licenses.bsd3;
maintainers = with maintainers; [ wegank ];
platforms = platforms.unix;
};
}

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@ -0,0 +1,41 @@
{ lib
, fetchFromGitHub
, ocamlPackages
}:
ocamlPackages.buildDunePackage rec {
pname = "stanc";
version = "2.31.0";
minimalOCamlVersion = "4.12";
src = fetchFromGitHub {
owner = "stan-dev";
repo = "stanc3";
rev = "v${version}";
hash = "sha256-5GOyKVt3LHN1D6UysOZT8isVQLKexwEcK0rwI45dDcg=";
};
# Error: This expression has type [ `Use_Sys_unix ]
postPatch = ''
substituteInPlace test/integration/run_bin_on_args.ml \
--replace "if Sys.file_exists (to_windows path) then to_windows cmd else cmd" "cmd"
'';
buildInputs = with ocamlPackages; [
core_unix
menhir
menhirLib
ppx_deriving
fmt
yojson
];
meta = with lib; {
homepage = "https://github.com/stan-dev/stanc3";
description = "The Stan compiler and utilities";
license = licenses.bsd3;
maintainers = with maintainers; [ wegank ];
platforms = platforms.unix;
};
}

View file

@ -15669,6 +15669,8 @@ with pkgs;
stalin = callPackage ../development/compilers/stalin { };
stanc = callPackage ../development/compilers/stanc { };
metaBuildEnv = callPackage ../development/compilers/meta-environment/meta-build-env { };
svd2rust = callPackage ../development/tools/rust/svd2rust { };