Merge master into staging-next

pkgs/development/libraries/arrow-cpp/default.nix

@@ -22,6 +22,7 @@
 , libnsl
 , lz4
 , minio
+, ninja
 , nlohmann_json
 , openssl
 , perl
@@ -30,6 +31,7 @@
 , rapidjson
 , re2
 , snappy
+, sqlite
 , thrift
 , tzdata
 , utf8proc
@@ -54,26 +56,26 @@ let
   arrow-testing = fetchFromGitHub {
     owner = "apache";
     repo = "arrow-testing";
-    rev = "1d8525e109a12a8c67c489eba48715a199609153";
-    hash = "sha256-tesDW/1yRyhZtpLbPvCVEsocs6KtstYofxB5GiSMEFM=";
+    rev = "634739c664433cec366b4b9a81d1e1044a8c5eda";
+    hash = "sha256-r1WVgJJsI7v485L6Qb+5i7kFO4Tvxyk1T0JBb4og6pg=";
   };
 
   parquet-testing = fetchFromGitHub {
     owner = "apache";
     repo = "parquet-testing";
-    rev = "d4d485956a643c693b5549e1a62d52ca61c170f1";
-    hash = "sha256-GmOAS8gGhzDI0WzORMkWHRRUl/XBwmNen2d3VefZxxc=";
+    rev = "acd375eb86a81cd856476fca0f52ba6036a067ff";
+    hash = "sha256-z/kmi+4dBO/dsVkJA4NgUoxl0pXi8RWIGvI8MGu/gcc=";
   };
 
 in
 stdenv.mkDerivation rec {
   pname = "arrow-cpp";
-  version = "6.0.1";
+  version = "7.0.0";
 
   src = fetchurl {
     url =
       "mirror://apache/arrow/arrow-${version}/apache-arrow-${version}.tar.gz";
-    hash = "sha256-N4az0t+VTQeLPmj5jS5a7Lqj+irM8HXXo6E8GHucUpQ=";
+    hash = "sha256-6PSbFJoV7O9OQPz6sbh8ETxrHuGGAFwWnlzfldMamd4=";
   };
   sourceRoot = "apache-arrow-${version}/cpp";
 
@@ -85,8 +87,8 @@ stdenv.mkDerivation rec {
     # ./cpp/thirdparty/versions.txt
     owner = "microsoft";
     repo = "mimalloc";
-    rev = "v1.7.2";
-    hash = "sha256-yHupYFgC8mJuLUSpuEAfwF7l6Ue4EiuO1Q4qN4T6wWc=";
+    rev = "v1.7.3";
+    hash = "sha256-Ca877VitpWyKmZNHavqgewk/P+tyd2xHDNVqveKh87M=";
   };
 
   ARROW_XSIMD_URL = fetchFromGitHub {
@@ -103,6 +105,7 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [
     cmake
+    ninja
     autoconf # for vendored jemalloc
     flatbuffers
   ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames;
@@ -156,6 +159,10 @@ stdenv.mkDerivation rec {
     "-DARROW_COMPUTE=ON"
     "-DARROW_CSV=ON"
     "-DARROW_DATASET=ON"
+    "-DARROW_ENGINE=ON"
+    "-DARROW_FILESYSTEM=ON"
+    "-DARROW_FLIGHT_SQL=${if enableFlight then "ON" else "OFF"}"
+    "-DARROW_IPC=ON"
     "-DARROW_JEMALLOC=${if enableJemalloc then "ON" else "OFF"}"
     "-DARROW_JSON=ON"
     "-DARROW_PLASMA=ON"
@@ -201,13 +208,10 @@ stdenv.mkDerivation rec {
         "TestMinioServer.Connect"
         "TestS3FS.*"
         "TestS3FSGeneric.*"
-      ] ++ lib.optionals enableGcs [
-        "GcsFileSystem.FileSystemCompare"
-        "GcsIntegrationTest.*"
       ];
     in
     lib.optionalString doInstallCheck "-${builtins.concatStringsSep ":" filteredTests}";
-  installCheckInputs = [ perl which ] ++ lib.optional enableS3 minio;
+  installCheckInputs = [ perl which sqlite ] ++ lib.optional enableS3 minio;
   installCheckPhase =
     let
       excludedTests = lib.optionals stdenv.isDarwin [
@@ -215,7 +219,7 @@ stdenv.mkDerivation rec {
         # path on Darwin. See https://github.com/NixOS/nix/pull/1085
         "plasma-external-store-tests"
         "plasma-client-tests"
-      ];
+      ] ++ [ "arrow-gcsfs-test" ];
     in
     ''
       runHook preInstallCheck

pkgs/development/python-modules/apache-beam/default.nix

@@ -29,6 +29,7 @@
 , pytest-xdist
 , pytestCheckHook
 , python
+, pythonAtLeast
 , python-dateutil
 , pytz
 , pyyaml
@@ -43,6 +44,7 @@
 buildPythonPackage rec {
   pname = "apache-beam";
   version = "2.35.0";
+  disabled = pythonAtLeast "3.10";
 
   src = fetchFromGitHub {
     owner = "apache";
@@ -60,7 +62,8 @@ buildPythonPackage rec {
   # See https://github.com/NixOS/nixpkgs/issues/156957.
   postPatch = ''
     substituteInPlace setup.py \
-      --replace "typing-extensions>=3.7.0,<4" "typing-extensions"
+      --replace "typing-extensions>=3.7.0,<4" "typing-extensions" \
+      --replace "pyarrow>=0.15.1,<7.0.0" "pyarrow"
   '';
 
   sourceRoot = "source/sdks/python";

pkgs/development/python-modules/folium/default.nix

@@ -1,37 +1,60 @@
 { lib
 , buildPythonPackage
-, fetchPypi
+, fetchFromGitHub
 , pythonOlder
-, pytest
-, numpy
-, nbconvert
-, pandas
-, mock
-, jinja2
+, pytestCheckHook
 , branca
+, jinja2
+, nbconvert
+, numpy
+, pandas
+, pillow
 , requests
+, selenium
+, setuptools-scm
 }:
 
 buildPythonPackage rec {
   pname = "folium";
   version = "0.12.1.post1";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "e91e57d8298f3ccf4cce3c5e065bea6eb17033e3c5432b8a22214009c266b2ab";
-  };
-
   disabled = pythonOlder "3.5";
 
-  checkInputs = [ pytest nbconvert pandas mock ];
-  propagatedBuildInputs = [ jinja2 branca requests numpy ];
+  src = fetchFromGitHub {
+    owner = "python-visualization";
+    repo = "folium";
+    rev = "v${version}";
+    sha256 = "sha256-4UseN/3ojZdDUopwZLpHZEBon1qDDvCWfdzxodi/BeA=";
+  };
 
-  # No tests in archive
-  doCheck = false;
+  SETUPTOOLS_SCM_PRETEND_VERSION = "v${version}";
 
-  checkPhase = ''
-    py.test
-  '';
+  nativeBuildInputs = [
+    setuptools-scm
+  ];
+
+  propagatedBuildInputs = [
+    branca
+    jinja2
+    numpy
+    requests
+  ];
+
+  checkInputs = [
+    nbconvert
+    pytestCheckHook
+    pandas
+    pillow
+    selenium
+  ];
+
+  disabledTests = [
+    # requires internet connection
+    "test_geojson"
+    "test_heat_map_with_weights"
+    "test_json_request"
+    "test_notebook"
+  ];
 
   meta = {
     description = "Make beautiful maps with Leaflet.js & Python";

pkgs/development/python-modules/p1monitor/default.nix

@@ -1,8 +1,11 @@
 { lib
 , aiohttp
+, aresponses
 , buildPythonPackage
 , fetchFromGitHub
 , poetry-core
+, pytest-asyncio
+, pytestCheckHook
 , pythonOlder
 , yarl
 }:
@@ -21,6 +24,12 @@ buildPythonPackage rec {
     sha256 = "1ciaclgq4aknldjqlqa08jcab28sbqrjxy5nqqwlnb2wlprg5ijz";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace '"0.0.0"' '"${version}"' \
+      --replace 'addopts = "--cov"' ""
+  '';
+
   nativeBuildInputs = [
     poetry-core
   ];
@@ -30,8 +39,11 @@ buildPythonPackage rec {
     yarl
   ];
 
-  # Project has no tests
-  doCheck = false;
+  checkInputs = [
+    aresponses
+    pytest-asyncio
+    pytestCheckHook
+  ];
 
   pythonImportsCheck = [ "p1monitor" ];
 

pkgs/development/python-modules/pypinyin/default.nix

@@ -6,13 +6,13 @@
 
 buildPythonPackage rec {
   pname = "pypinyin";
-  version = "0.44.0";
+  version = "0.45.0";
 
   src = fetchFromGitHub {
     owner = "mozillazg";
     repo = "python-pinyin";
     rev = "v${version}";
-    sha256 = "sha256-LYiiZvpM/V3QRyTUXGWGnSnR0AnqWfTW0xJB4Vnw7lI=";
+    sha256 = "0jz5b5a2bqz2pvx4imnlvz9n765b5yji27fmpijspalkpjcnpa4q";
   };
 
   postPatch = ''

pkgs/development/python-modules/tmb/default.nix

@@ -15,6 +15,8 @@ buildPythonPackage rec {
     sha256 = "sha256-xwzaJuiQxExUA5W4kW7t1713S6NOvDNagcD3/dwA+DE=";
   };
 
+  VERSION = version;
+
   propagatedBuildInputs = [ requests ];
 
   # Project has no tests

pkgs/development/python-modules/twentemilieu/default.nix

@@ -26,7 +26,8 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace "--cov" ""
+      --replace "--cov" "" \
+      --replace '"0.0.0"' '"${version}"'
   '';
 
   nativeBuildInputs = [

pkgs/development/python-modules/versiontag/default.nix

@@ -11,6 +11,11 @@ buildPythonPackage rec {
     sha256 = "1axv2214ykgv5adajv10v2zy5fr9v77db54rkik6ja29p66zl90n";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "get_version(pypi=True)" '"${version}"'
+  '';
+
   checkInputs = [ git ];
 
   pythonImportsCheck = [ "versiontag" ];

pkgs/development/python-modules/waitress-django/default.nix

@@ -1,11 +1,16 @@
-{ buildPythonPackage, django, waitress }:
+{ lib, buildPythonPackage, django, waitress }:
 
 buildPythonPackage {
   pname = "waitress-django";
-  version = "0.0.0";
+  version = "1.0.0";
 
   src = ./.;
   pythonPath = [ django waitress ];
   doCheck = false;
-  meta.description = "A waitress WSGI server serving django";
+
+  meta = with lib; {
+    description = "A waitress WSGI server serving django";
+    license = licenses.mit;
+    maintainers = with maintainers; [ basvandijk ];
+  };
 }

pkgs/development/python-modules/waitress-django/setup.py

@@ -3,7 +3,7 @@
 from distutils.core import setup
 
 setup( name         = "waitress-django"
-     , version      = "0.0.0"
+     , version      = "1.0.0"
      , description  = "A waitress WSGI server serving django"
      , author       = "Bas van Dijk"
      , author_email = "v.dijk.bas@gmail.com"