Merge pull request #231808 from fabaff/numpyro-fix
python310Packages.numpyro: add missing input for tests
This commit is contained in:
commit
e28384a49f
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@ -2,6 +2,7 @@
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, buildPythonPackage
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, buildPythonPackage
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, fetchFromGitHub
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, fetchFromGitHub
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, emcee
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, emcee
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, h5netcdf
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, matplotlib
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, matplotlib
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, netcdf4
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, netcdf4
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, numba
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, numba
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@ -31,7 +32,7 @@
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "arviz";
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pname = "arviz";
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version = "0.15.0";
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version = "0.15.1";
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format = "setuptools";
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format = "setuptools";
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disabled = pythonOlder "3.7";
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disabled = pythonOlder "3.7";
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@ -40,10 +41,11 @@ buildPythonPackage rec {
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owner = "arviz-devs";
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owner = "arviz-devs";
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repo = pname;
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repo = pname;
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rev = "refs/tags/v${version}";
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rev = "refs/tags/v${version}";
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hash = "sha256-LcdITCT9Bvycfj/taXhzkjn4IfZrxWX9MYXD6+MifOs=";
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hash = "sha256-jjA+yltvpPZldIxXXqu1bXCLqpiU5/NBYTPlI9ImGVs=";
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};
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};
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propagatedBuildInputs = [
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propagatedBuildInputs = [
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h5netcdf
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matplotlib
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matplotlib
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netcdf4
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netcdf4
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numpy
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numpy
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@ -80,11 +82,6 @@ buildPythonPackage rec {
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"arviz/tests/base_tests/"
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"arviz/tests/base_tests/"
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];
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];
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disabledTestPaths = [
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# Remove tests as dependency creates a circular dependency
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"arviz/tests/external_tests/test_data_pymc.py"
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];
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disabledTests = [
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disabledTests = [
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# Tests require network access
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# Tests require network access
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"test_plot_separation"
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"test_plot_separation"
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@ -94,6 +91,8 @@ buildPythonPackage rec {
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"test_plot_kde"
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"test_plot_kde"
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"test_plot_kde_2d"
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"test_plot_kde_2d"
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"test_plot_pair"
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"test_plot_pair"
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# Array mismatch
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"test_plot_ts"
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];
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];
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pythonImportsCheck = [
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pythonImportsCheck = [
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@ -103,6 +102,7 @@ buildPythonPackage rec {
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meta = with lib; {
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meta = with lib; {
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description = "Library for exploratory analysis of Bayesian models";
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description = "Library for exploratory analysis of Bayesian models";
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homepage = "https://arviz-devs.github.io/arviz/";
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homepage = "https://arviz-devs.github.io/arviz/";
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changelog = "https://github.com/arviz-devs/arviz/blob/v${version}/CHANGELOG.md";
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license = licenses.asl20;
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license = licenses.asl20;
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maintainers = with maintainers; [ omnipotententity ];
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maintainers = with maintainers; [ omnipotententity ];
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};
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};
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@ -21,9 +21,11 @@ buildPythonPackage rec {
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hash = "sha256-kyw7Vzvtc3Dr/J6ALNYPGk2lI277EbNu7/iXMk12v1Y=";
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hash = "sha256-kyw7Vzvtc3Dr/J6ALNYPGk2lI277EbNu7/iXMk12v1Y=";
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};
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};
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nativeBuildInputs = [
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SETUPTOOLS_SCM_PRETEND_VERSION = version;
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setuptools-scm
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];
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nativeBuildInputs = [
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setuptools-scm
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];
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propagatedBuildInputs = [
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propagatedBuildInputs = [
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h5py
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h5py
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@ -7,6 +7,7 @@
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, numpy
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, numpy
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, pytestCheckHook
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, pytestCheckHook
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, pythonOlder
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, pythonOlder
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, tensorflow-probability
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, tqdm
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, tqdm
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}:
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}:
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@ -31,6 +32,7 @@ buildPythonPackage rec {
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];
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];
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nativeCheckInputs = [
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nativeCheckInputs = [
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tensorflow-probability
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pytestCheckHook
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pytestCheckHook
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];
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];
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@ -46,11 +48,16 @@ buildPythonPackage rec {
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"test_gamma_poisson"
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"test_gamma_poisson"
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"test_gof"
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"test_gof"
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"test_hpdi"
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"test_hpdi"
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"test_kl_dirichlet_dirichlet"
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"test_kl_univariate"
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"test_kl_univariate"
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"test_mean_var"
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"test_mean_var"
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# Tests want to download data
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# Tests want to download data
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"data_load"
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"data_load"
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"test_jsb_chorales"
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"test_jsb_chorales"
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# RuntimeWarning: overflow encountered in cast
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"test_zero_inflated_logits_probs_agree"
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# NameError: unbound axis name: _provenance
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"test_model_transformation"
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];
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];
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meta = with lib; {
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meta = with lib; {
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