python310Packages.funsor: init at 0.4.5
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78
pkgs/development/python-modules/funsor/default.nix
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78
pkgs/development/python-modules/funsor/default.nix
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@ -0,0 +1,78 @@
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{ lib
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, buildPythonPackage
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, pythonOlder
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, fetchFromGitHub
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, makefun
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, multipledispatch
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, numpy
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, opt-einsum
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, typing-extensions
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, pyro-ppl
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, torch
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, pandas
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, pillow
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, pyro-api
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, pytest
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, pytest-xdist
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, requests
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, scipy
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, torchvision
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}:
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buildPythonPackage rec {
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pname = "funsor";
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version = "0.4.5";
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disabled = pythonOlder "3.7";
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src = fetchFromGitHub {
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owner = "pyro-ppl";
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repo = "funsor";
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rev = "refs/tags/${version}";
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hash = "sha256-3JxnRlJN/kYstcIKt8cvDmqnp8oyoA4jkMBDVuAMa5Q=";
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};
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# Disable the tests that rely on downloading assets from the internet as well as the linting checks.
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patches = [
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./patch-makefile-for-tests.patch
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];
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propagatedBuildInputs = [
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makefun
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multipledispatch
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numpy
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opt-einsum
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typing-extensions
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];
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nativeCheckInputs = [
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# Backend
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pyro-ppl
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torch
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pandas
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pillow
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pyro-api
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pytest
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pytest-xdist
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requests
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scipy
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torchvision
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];
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# Use the included Makefile to run the tests.
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checkPhase = ''
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export FUNSOR_BACKEND=torch
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make test
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'';
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pythonImportsCheck = [ "funsor" ];
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meta = with lib; {
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description = "Functional tensors for probabilistic programming";
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homepage = "https://funsor.pyro.ai";
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changelog = "https://github.com/pyro-ppl/funsor/releases/tag/${version}";
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license = licenses.asl20;
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maintainers = with maintainers; [ GaetanLepage ];
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};
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}
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@ -0,0 +1,27 @@
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diff --git a/Makefile b/Makefile
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index d4b862c..755dfe3 100644
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--- a/Makefile
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+++ b/Makefile
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@@ -23,7 +23,7 @@ format: license FORCE
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black .
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isort .
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-test: lint FORCE
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+test: FORCE
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ifeq (${FUNSOR_BACKEND}, torch)
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pytest -v -n auto test/
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FUNSOR_DEBUG=1 pytest -v test/test_gaussian.py
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@@ -45,10 +45,10 @@ ifeq (${FUNSOR_BACKEND}, torch)
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python examples/slds.py -n 2 -t 50
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python examples/pcfg.py --size 3
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python examples/talbot.py -n 2
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- python examples/vae.py --smoke-test
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+ # python examples/vae.py --smoke-test
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python examples/eeg_slds.py --num-steps 2 --fon --test
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- python examples/mixed_hmm/experiment.py -d seal -i discrete -g discrete -zi --smoke
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- python examples/mixed_hmm/experiment.py -d seal -i discrete -g discrete -zi --parallel --smoke
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+ # python examples/mixed_hmm/experiment.py -d seal -i discrete -g discrete -zi --smoke
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+ # python examples/mixed_hmm/experiment.py -d seal -i discrete -g discrete -zi --parallel --smoke
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python examples/sensor.py --seed=0 --num-frames=2 -n 1
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python examples/adam.py --num-steps=21
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@echo PASS
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@ -4047,6 +4047,8 @@ self: super: with self; {
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funcy = callPackage ../development/python-modules/funcy { };
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funsor = callPackage ../development/python-modules/funsor { };
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furl = callPackage ../development/python-modules/furl { };
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furo = callPackage ../development/python-modules/furo { };
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