pythonPackages.cnvkit: init at 0.9.6
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48
pkgs/development/python-modules/cnvkit/default.nix
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48
pkgs/development/python-modules/cnvkit/default.nix
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@ -0,0 +1,48 @@
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{ lib
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, fetchPypi
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, rPackages
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, rWrapper
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, buildPythonPackage
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, biopython
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, numpy
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, scipy
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, pandas
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, matplotlib
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, reportlab
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, pysam
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, future
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, pillow
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, pomegranate
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, pyfaidx
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}:
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buildPythonPackage rec {
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pname = "CNVkit";
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version = "0.9.6";
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src = fetchPypi {
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inherit pname version;
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sha256 = "1hj8c98s538i0hg5mrz4bw4v07qmcl51rhxq611rj2nglnc9r25y";
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};
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propagatedBuildInputs = [
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biopython
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numpy
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scipy
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pandas
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matplotlib
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reportlab
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pyfaidx
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pysam
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future
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pillow
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pomegranate
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];
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meta = with lib; {
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homepage = "https://cnvkit.readthedocs.io";
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description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data";
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license = licenses.asl20;
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maintainers = [ maintainers.jbedo ];
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};
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}
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@ -346,6 +346,8 @@ in {
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clustershell = callPackage ../development/python-modules/clustershell { };
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cnvkit = callPackage ../development/python-modules/cnvkit { };
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cozy = callPackage ../development/python-modules/cozy { };
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curio = callPackage ../development/python-modules/curio { };
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