Commit graph

17 commits

Author SHA1 Message Date
Vincent Laporte 7473ac950e
ocamlPackages.phylogenetics: use Dune 3 2023-02-11 13:49:56 +01:00
Ulrik Strid c53a63adf1 ocamlPackages treewide: strictDeps all packages 2023-02-03 08:59:34 +01:00
Guillaume Girol 33afbf39f6 treewide: switch to nativeCheckInputs
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
2023-01-21 12:00:00 +00:00
Ben Darwin 287131c409 ocamlPackages.phylogenetics: run full test suite
As of upstream commit
a107e96fa6
, the full tests using `bppsuite`, although barely longer than the short
tests, were not being run.
2022-11-22 10:02:45 +01:00
Aaron L. Zeng 4f6ddfdd23 Add Jane Street ocaml packages version 0.15
- ocamlPackages.tls*: 0.15.2 -> 0.15.3
- ocamlPackages.bistro: unstable-2021-11-13 -> unstable-2022-05-07
- ocamlPackages.phylogenetics: 0.1.0 -> unstable-2022-05-06
2022-07-07 00:32:11 -04:00
Malo Bourgon f7ef6329bb ocamlPackages: add meta.mainProgram to many packages 2022-05-14 11:31:07 +02:00
Aaron L. Zeng 983a9f4bb6 ocamlPackages.phylogenetics: 0.0.0 -> 0.1.0 2022-04-12 16:02:48 +02:00
Vincent Laporte ecd0acf293 ocamlPackages.printbox: 0.5 → 0.6
ocamlPackages.printbox-text: init at 0.6
2022-02-02 07:31:55 +01:00
Ben Darwin 2d47affbfb ocamlPackages.phylogenetics: unstable-2020-11-23 -> 0.0.0 2021-11-12 20:21:29 +01:00
Pavol Rusnak a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Vincent Laporte b6f7f1f673 ocamlPackages.janeStreet: 0.13 → 0.14
ocamlPackages.biocaml: 0.10.1 → 0.11.1

ocamlPackages.bistro: fix for Core 0.14

ocamlPackages.js_of_ocaml: 3.7.0 → 3.7.1

ocamlPackages.ocaml-r: 0.2.0 → 0.4.0

ocamlPackages.phylogenetics: 2020-01-25 → 2020-11-23

Co-authored-by: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
2020-12-18 21:03:56 +01:00
Vincent Laporte 3e7a2b9147 ocamlPackages.janeStreet: 0.12 → 0.13
ocamlPackages.bistro: fix for core-0.13
ocamlPackages.phylogenetics: 2020-01-05 → 2020-01-25
2020-04-20 08:38:31 +02:00
Vincent Laporte 34db9b5ee3 ocamlPackages.phylogenetics: 2019-11-15 → 2020-01-05 2020-04-01 17:29:30 +02:00
Vincent Laporte 0229936bbe buildDunePackage: add a “useDune2” option 2020-03-23 09:12:50 +01:00
Ben Darwin fd9b40d076 ocamlPackages_latest.phylogenetics: dune2/fix meta 2020-02-27 12:22:14 -05:00
Ben Darwin 3fa5a19cf8 ocamlPackages_latest.phylogenetics: init at unstable-2019-11-15 2019-12-06 12:00:44 -05:00