77 lines
2.7 KiB
Nix
77 lines
2.7 KiB
Nix
{ version, rev, sourceSha256 }:
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{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper
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, pkg-config, libX11, libuuid, xz, vtk, Cocoa }:
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stdenv.mkDerivation rec {
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pname = "itk";
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inherit version;
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itkGenericLabelInterpolatorSrc = fetchFromGitHub {
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owner = "InsightSoftwareConsortium";
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repo = "ITKGenericLabelInterpolator";
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rev = "2f3768110ffe160c00c533a1450a49a16f4452d9";
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hash = "sha256-Cm3jg14MMnbr/sP+gqR2Rh25xJjoRvpmY/jP/DKH978=";
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};
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itkAdaptiveDenoisingSrc = fetchFromGitHub {
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owner = "ntustison";
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repo = "ITKAdaptiveDenoising";
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rev = "24825c8d246e941334f47968553f0ae388851f0c";
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hash = "sha256-deJbza36c0Ohf9oKpO2T4po37pkyI+2wCSeGL4r17Go=";
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};
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src = fetchFromGitHub {
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owner = "InsightSoftwareConsortium";
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repo = "ITK";
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inherit rev;
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sha256 = sourceSha256;
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};
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postPatch = ''
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substituteInPlace CMake/ITKSetStandardCompilerFlags.cmake \
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--replace "-march=corei7" "" \
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--replace "-mtune=native" ""
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substituteInPlace Modules/ThirdParty/GDCM/src/gdcm/Utilities/gdcmopenjpeg/src/lib/openjp2/libopenjp2.pc.cmake.in \
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--replace "@OPENJPEG_INSTALL_LIB_DIR@" "@OPENJPEG_INSTALL_FULL_LIB_DIR@"
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ln -sr ${itkGenericLabelInterpolatorSrc} Modules/External/ITKGenericLabelInterpolator
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ln -sr ${itkAdaptiveDenoisingSrc} Modules/External/ITKAdaptiveDenoising
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'';
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cmakeFlags = [
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"-DBUILD_EXAMPLES=OFF"
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"-DBUILD_SHARED_LIBS=ON"
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"-DITK_FORBID_DOWNLOADS=ON"
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"-DModule_ITKMINC=ON"
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"-DModule_ITKIOMINC=ON"
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"-DModule_ITKIOTransformMINC=ON"
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"-DModule_ITKVtkGlue=ON"
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"-DModule_ITKReview=ON"
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"-DModule_MGHIO=ON"
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"-DModule_AdaptiveDenoising=ON"
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"-DModule_GenericLabelInterpolator=ON"
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];
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nativeBuildInputs = [ cmake xz makeWrapper ];
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buildInputs = [ libX11 libuuid vtk ] ++ lib.optionals stdenv.isDarwin [ Cocoa ];
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# Due to ITKVtkGlue=ON and the additional dependencies needed to configure VTK 9
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# (specifically libGL and libX11 on Linux),
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# it's now seemingly necessary for packages that configure ITK to
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# also include configuration deps of VTK, even if VTK is not required or available.
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# These deps were propagated from VTK 9 in https://github.com/NixOS/nixpkgs/pull/206935,
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# so we simply propagate them again from ITK.
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# This admittedly is a hack and seems like an issue with VTK 9's CMake configuration.
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propagatedBuildInputs = vtk.propagatedBuildInputs;
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postInstall = ''
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wrapProgram "$out/bin/h5c++" --prefix PATH ":" "${pkg-config}/bin"
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'';
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meta = {
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description = "Insight Segmentation and Registration Toolkit";
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homepage = "https://www.itk.org/";
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license = lib.licenses.asl20;
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maintainers = with lib.maintainers; [viric];
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};
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}
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