60 lines
1.1 KiB
Nix
60 lines
1.1 KiB
Nix
{ lib
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, buildDunePackage
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, fetchFromGitHub
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, ppx_deriving
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, bppsuite
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, alcotest
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, angstrom-unix
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, biocaml
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, core
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, gsl
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, lacaml
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, menhir
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, menhirLib
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, printbox-text
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}:
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buildDunePackage rec {
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pname = "phylogenetics";
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version = "unstable-2022-05-06";
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src = fetchFromGitHub {
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owner = "biocaml";
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repo = pname;
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rev = "cd7c624d0f98e31b02933ca4511b9809b26d35b5";
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sha256 = "sha256:0w0xyah3hj05hxg1rsa40hhma3dm1cyq0zvnjrihhf22laxap7ga";
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};
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minimalOCamlVersion = "4.08";
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duneVersion = "3";
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nativeCheckInputs = [ bppsuite ];
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checkInputs = [ alcotest ];
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nativeBuildInputs = [ menhir ];
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propagatedBuildInputs = [
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angstrom-unix
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biocaml
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core
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gsl
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lacaml
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menhirLib
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ppx_deriving
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printbox-text
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];
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checkPhase = ''
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runHook preCheck
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dune build @app/fulltest
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runHook postCheck
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'';
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doCheck = true;
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meta = with lib; {
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description = "Algorithms and datastructures for phylogenetics";
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homepage = "https://github.com/biocaml/phylogenetics";
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license = licenses.cecill-b;
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maintainers = [ maintainers.bcdarwin ];
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mainProgram = "phylosim";
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};
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}
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