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Merge pull request #108219 from prusnak/viennarna

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ViennaRNA: init at 2.4.17
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Pavol Rusnak 2021-01-04 18:04:56 +01:00 committed by GitHub
parent 1a57d96edd cb0b77e2f5
commit bf77245202
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3 changed files with 41 additions and 0 deletions
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37
pkgs/applications/science/molecular-dynamics/viennarna/default.nix Normal file
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@ -0,0 +1,37 @@
{ stdenv
, fetchurl
, gsl
, mpfr
, perl
, python3
}:
stdenv.mkDerivation rec {
pname = "ViennaRNA";
version = "2.4.17";
src = fetchurl {
url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/${pname}-${version}.tar.gz";
sha256 = "08f1h2a8fn1s2zwf1244smiydhgwxgcnzy6irpdlmpvwygv0irmi";
};
buildInputs = [
gsl
mpfr
perl
python3
];
configureFlags = [
"--with-cluster"
"--with-kinwalker"
];
meta = with stdenv.lib; {
description = "Prediction and comparison of RNA secondary structures";
homepage = "https://www.tbi.univie.ac.at/RNA/";
license = licenses.unfree;
maintainers = with maintainers; [ prusnak ];
platforms = platforms.unix;
};
}

2
pkgs/top-level/all-packages.nix
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@ -28764,6 +28764,8 @@ in
giflib = giflib_4_1;
};
ViennaRNA = callPackage ../applications/science/molecular-dynamics/viennarna { };
viewnior = callPackage ../applications/graphics/viewnior { };
vimUtils = callPackage ../misc/vim-plugins/vim-utils.nix { };

2
pkgs/top-level/python-packages.nix
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@ -7790,6 +7790,8 @@ in {
vidstab = callPackage ../development/python-modules/vidstab { };
ViennaRNA = toPythonModule pkgs.ViennaRNA;
viewstate = callPackage ../development/python-modules/viewstate { };
vine = callPackage ../development/python-modules/vine { };